| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46716 |
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| Symbol | HEM12 |
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| ID | 4839596 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1381163 |
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| End bp | 1382431 |
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| Gene Length | 1269 bp |
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| Protein Length | 362 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390911 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | XP_001384951 |
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| Protein GI | 126136855 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00457298 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGAAT TCGCACCCTT GAAGAACGAC TTGATTCTCA GAGCTGCCAG AGGCGAGAAG
GTCGAAAGAC CACCTATTTG GATCATGGTA AGTCTGAAGT GGAATATTTG AGATTCGGAA
TTGAAGATAA AGTCACATAC AAAGCAGAGC TTCAAATTAG AATGCAAATA ACAATCGAAT
TCTGTTAGTT GTAATATCAT TGTTATCGTA CTTGTCTCGT ATCTAAGATT CGTGGTCTTA
CGTATCACAA TATACTAACC TTCGCAGAGA CAAGCTGGAA GATATCTTCC TGAATACCAC
GAAGCCAAAG GTAACAGAGA TTTCTTTGAA ACTTGTAGAG ATGCAGAGAT AGCATCGGAA
ATCACTATTC AGCCCGTAAA CCACTTTGAT GGCTTAATAG ATGCAGCCAT CATCTTCAGT
GATATCTTGG TGATTCCCCA GGCCATGGGA TTCGAGATTG AGATGCTCGA AGGTAAAGGT
CCAGTATTCG TAGCTCCTTT GAGATCTCCT GATGATTTGG CTAGAGTAAA CTTCCAGCCT
GATGTCTTGA AGAGTTTGGA CTGGGCGTTC AAGTCCATCA CTCTTACCAG AACCAAATTG
AACGGCAGAG TGCCATTGTT GGGCTTTGTA GGAGCACCTT GGACTTTGTT GGTTTATATG
ACCGAAGGTC AGGGTTCCAA GATGTTCCGT TTTGTCAAGG AATGGATCTA CAAATATACT
GAAGAGTCAC ACAAATTGTT ACAGGCCATC ACAGATGCCT GTGTCGAATT CTTAGCTCAA
CAAGTTGTTG CTGGAGCTCA GATGTTGCAG GTTTTCGAGT CTTGGGCCGG TGAATTGGGA
CCTCGTGAGT TTGACGAGTT CTCGTTGCCA TACTTGAGAC AGATCGCTGA AAAATTACCA
AAGAGACTTG TAGAACTCGG AGTGACGGAA AAGATCCCCC TAACTGTATT TGCCAAGGGT
GCCTGGTATG CCTTGGACGA TCTCTGTGAA TCTGGCTACG ACACTGTTTC CTTGGATTGG
TTGTATAAGC CAGAAGACGC TGTCAAGGTG GTCAACAACA GAAGAATCAC TTTGCAAGGG
AACTTAGATC CAGGTATCAT GTACGGTTCA GATGAAGTGA TCTCTCAAAA GGTAGAAGAA
ATGATCAAGG GCTTTGGAGG TGGAAAACAA AACTACATCA TCAACTTTGG TCATGGAACT
CATCCATTCA TGAAGCCCGA GAAGATCGAG CATTTCTTGA AGGAATGCCA TAAGTATGGT
TCCCAATAG
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| Protein sequence | MPEFAPLKND LILRAARGEK VERPPIWIMR QAGRYLPEYH EAKGNRDFFE TCRDAEIASE
ITIQPVNHFD GLIDAAIIFS DILVIPQAMG FEIEMLEGKG PVFVAPLRSP DDLARVNFQP
DVLKSLDWAF KSITLTRTKL NGRVPLLGFV GAPWTLLVYM TEGQGSKMFR FVKEWIYKYT
EESHKLLQAI TDACVEFLAQ QVVAGAQMLQ VFESWAGELG PREFDEFSLP YLRQIAEKLP
KRLVELGVTE KIPLTVFAKG AWYALDDLCE SGYDTVSLDW LYKPEDAVKV VNNRRITLQG
NLDPGIMYGS DEVISQKVEE MIKGFGGGKQ NYIINFGHGT HPFMKPEKIE HFLKECHKYG
SQ
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