| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46658 |
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| Symbol | BTS1 |
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| ID | 4839277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 791640 |
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| End bp | 792683 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390592 |
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| Product | geranylgeranyl diphosphate synthase |
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| Protein accession | XP_001384814 |
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| Protein GI | 150865549 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.606185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACC CGCAGATCGA CATAGATGTG CTCATCAGGC CCGTAAACGG CTACGATCGG
CCAGAAAACG AACCCATTCT GGAACCATAC CGGTACTTGG CCGAGATTCC AGGCAATAAT
AGCAACGTTA GAGGCAAGTT CCTCGAGGCC TTCAACCGTC TTTACTTCCA TATTGAACAG
AAACCACTAT TGGATGCCAT AGGCGACATT ATTCTGATTT TCCACAACGC TTCTCTTCTC
ATAGACGACA TTGAAGACTC ATCTGAGTAC AGAAGAGGAT TTCCAGCAGC CCACACGAAG
TACGGAATCC CACTAACTAT CAACTGTGGA AACCTAATGT ACTTTGTTGC ACTCCAGAAA
GCACAGATCA CCCTTCCACG TCTTTATAGC GATCTTAACT CCGATTTAGA AATCGACATA
GACAAACTCA AGTTCGAAAC TTCACAGATC TTGATAGACG AAATGTTGAA TCTTCATCAC
GGACAAGGAC TAGACATCTA CTGGAGAGAC TACTTGCCAG AAACACAGGA AAGTTTGCCA
CTGGTTCAAG ACTACTTGCT GATGGTAAAG GACAAAACTG GTGGCTTATT CCGGCTCTCA
ATAAAGTTGC TTGCTCTCTT CTCTAAACGT GAAACAACTG ATCTCATACC TATAGCCAAT
CTCTTGGGCA TAATATACCA GGTCAGAGAC GATTATTTGA ACTTGACATC GTCCAAATAC
TCCCATATGA AAGGAGTCGT AGGTGAGGAC TTGGTAGAAG GAAAACTTTC ATTGCCCATC
TTGCACTGTT TGCAACTTTC AGACAATTCG CCAGTTCACG AACTTTTGTA TAATACACTG
TCCAGCGAGG AGCGAAGAGA AAAACCCCAA CTCATAGCAC AGTGTATTGA CTACATGACA
AAAGATTCGG AATCTCTACA ATTTACGTAC GACTTGCTCC AGAAATACCA CGATAAGGTA
AAACTGATGA TCGAGGATAC AGAAGTAGAT AATGCTCTGG ATTCGATGCT TTTTCAGATA
ATTGATCAGT TGGGCCAAGT ATGA
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| Protein sequence | MEDPQIDIDV LIRPVNGYDR PENEPISEPY RYLAEIPGNN SNVRGKFLEA FNRLYFHIEQ
KPLLDAIGDI ISIFHNASLL IDDIEDSSEY RRGFPAAHTK YGIPLTINCG NLMYFVALQK
AQITLPRLYS DLNSDLEIDI DKLKFETSQI LIDEMLNLHH GQGLDIYWRD YLPETQESLP
SVQDYLSMVK DKTGGLFRLS IKLLALFSKR ETTDLIPIAN LLGIIYQVRD DYLNLTSSKY
SHMKGVVGED LVEGKLSLPI LHCLQLSDNS PVHELLYNTS SSEERREKPQ LIAQCIDYMT
KDSESLQFTY DLLQKYHDKV KSMIEDTEVD NASDSMLFQI IDQLGQV
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