| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46601 |
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| Symbol | |
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| ID | 4839501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1330392 |
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| End bp | 1332434 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390816 |
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| Product | predicted protein |
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| Protein accession | XP_001385259 |
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| Protein GI | 150865870 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.628004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0180876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA AGAGAGGTAT TGATTCAGAG CAGGTGCTTG CTTCTTCCAA GAAGTTCAAG
GTGGAAACAC CAGAAGTTGC CAAGAAGTCT ATTCAGGAGC ATGAAGTAGG CATAACTTCT
TATATCAACA AGACCGAGAC CGGATTTACT GGTCTCATCA AGCTGCTCTA TTCAGATTTC
CAGGTCAACG AAATCGATGT CCTGGGTAAT GTCGTCCATT TGGTCGATGA AGGCATTGAT
GTAGGAAAGA GCAAGAAGGA AAGAAAGATG GAAAAGAGGG CCGAAGACAG AAAGGAGTTA
CAGGGCAAGA CTGAAGAAGA AATAGAAGCT ATCAAAGCCC AGAAAAAAGA AGAAGAAGAA
AACAAGTCCA AGTACGATTT ATCAGATGAA CATCGTCAAG AGCTTTTGAC TTACATCACC
AATGACGAAT TGGCCCAGAT AGAAGAGTTG TTCTCTACAG GAAACAACAT GGAAACAAAG
ACTTCCTTTG ATGATAAGCA ACAGCGTGGA AAATTGCACC AATTGCTTAG AGCAGCCTTC
CAGGGCAAGT TGGAGTCCAT TACTTCGCCA GAAAATACAT TCAAGATCGC CATAGCTAAG
AAAACTTCTA GAGGAAGACA GCATCCTCAA GAGAGCATGC ACCATGTTGA TGAGAACGGA
ATTTTGAACT ATGGATTGGG AGCTTTCAAG CCTTACTTGC ATTTCACTGT TTTCAAGGAA
AATAGAGAAA CTATGGAGGT AGCCTCCACC ATTTCCAAGT TCTTGAGAAT ACCTCACAAA
GCAATTAACT ATGCTGGTAC CAAAGACAGA AGAGGAGCCA CTTGTCAGAG ATTCAGTATT
CATAAAGGAA AGGTTGTTAG AGTCAACTCG TTGAACAAGG CCTTGAAGAA TACCGTTTTA
GGTGGATTCA CCTATGAAGA CTCTCCCTTG GGATTGGGTG ATTTGAAGGG TAACCAATTC
ACAATCACTA TCAGAGATGT TGAACCATTG GGCGGAGAGA ACCTTGCTGA AATTGTCGAC
AATAGTTTCA CATCGCTCAA GGAAAAGGGA TTTATTAACT ACTTTGGAAT GCAAAGGTTT
GGTTCTTTTT CGATCTCTAC ACATATGCTT GGTATTCATC TCTTGAAAGA AGAATGGAAA
GATGCCGCCG AGCTTATCTT GTCAGAACAG GATATCGTCG CACCAGACTC GATTGAAGCC
AGAAGAATCT GGGCGGAAAC CAAGAACCCA TCATTGACAC TTAAGAAGTT ACCTCACTAC
TTTTCTGCAG AAACAGCCAT CTTGAAGGTG TTAGACACTG AACAATTAGA CGAAAACGAA
GAGTATGGAA AGAATTCCTA TTTCAAGAGT ATCATGGCTA TTCCTAAGAA CTTGCGAATG
ATGTACTCGC ATGCCTACCA ATCGTACGTG TGGAACTTGG TTGCATCCAA GAGAATTGAA
TTGTTTGGTC TTGAGCTACA AGAAGGAGAT TTAGTCATTG ACGACGAAAT CAAGGTCAAA
TCTGACCAAG ATGACGATTT TGAAGAAGAT GTCAAAGTCA ACAGAGATGT CAAGGTTAAA
TCTATTACTA AGGAAGACGT GGAATCTGGA AAATATAGTA TCTACGACGT TGTTTTGCCA
ACTCCAGGAT TCAAGGTCCA GTATCCCACT AATGAGAAAT TGGCGCAAGT CTATGTTCAA
ACAATGGCAC AAGACGGCTT GGACCCATAT AAGATGGGCA GAAGAATCAA AGAGTTCTCG
TTAACTGGAT CTTACCGTAA CCTTATGACC AGGCCAGAGA ATTTGACCTA CAAGATTGTC
AAATACAGCG ACAACTCCGT TCCTTTGGTA AGAACAGATT TGGAGATCTT GAGACTCAAG
AAAGAAGGCA AGGATGTCGA AAGAATCATC AAGGTCGAAG GTGATGAAGC TACCAAGACT
GCTGTGGTTC TCACTATGCA ATTGGGAGTA AGCTCTTATG CCACTATGGC TATGAGAGAA
TTCATGAAGG CTGATACTTC CAGATGGAGC GAAAACATGA TGAAAAAAGA GGAGACGAAA
TAG
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| Protein sequence | MSQKRGIDSE QVLASSKKFK VETPEVAKKS IQEHEVGITS YINKTETGFT GLIKSLYSDF
QVNEIDVSGN VVHLVDEGID VGKSKKERKM EKRAEDRKEL QGKTEEEIEA IKAQKKEEEE
NKSKYDLSDE HRQELLTYIT NDELAQIEEL FSTGNNMETK TSFDDKQQRG KLHQLLRAAF
QGKLESITSP ENTFKIAIAK KTSRGRQHPQ ESMHHVDENG ILNYGLGAFK PYLHFTVFKE
NRETMEVAST ISKFLRIPHK AINYAGTKDR RGATCQRFSI HKGKVVRVNS LNKALKNTVL
GGFTYEDSPL GLGDLKGNQF TITIRDVEPL GGENLAEIVD NSFTSLKEKG FINYFGMQRF
GSFSISTHML GIHLLKEEWK DAAELILSEQ DIVAPDSIEA RRIWAETKNP SLTLKKLPHY
FSAETAILKV LDTEQLDENE EYGKNSYFKS IMAIPKNLRM MYSHAYQSYV WNLVASKRIE
LFGLELQEGD LVIDDEIKVK SDQDDDFEED VKVNRDVKVK SITKEDVESG KYSIYDVVLP
TPGFKVQYPT NEKLAQVYVQ TMAQDGLDPY KMGRRIKEFS LTGSYRNLMT RPENLTYKIV
KYSDNSVPLV RTDLEILRLK KEGKDVERII KVEGDEATKT AVVLTMQLGV SSYATMAMRE
FMKADTSRWS ENMMKKEETK
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