Gene PICST_46510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46510 
Symbol 
ID4839381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1051607 
End bp1052083 
Gene Length477 bp 
Protein Length158 aa 
Translation table12 
GC content45% 
IMG OID640390696 
Productpredicted protein 
Protein accessionXP_001385212 
Protein GI126137377 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TATAGTCGTG GTTACAGATC CGGTACTCGT TACGCTTTCC AACGTGACTT CAAGAAGCAT 
GGTACCATTG CTTTGTCCAC CTACTTGAAG GTTTACAAGG TTGGTGACAT TGTTGACATC
AAGGCCAACG GTGCTGTCCA AAAGGGTATG CCACACAAGT ACTACCACGG TAAGACTGGT
ATTGTCTACA ACGTCACCAA GTCTTCTGTC GGTGTCATCA TCAACAAGGT TGTCGGTCAC
AGATATCTTG AAAAGAGAGT CAACTTGAGA GTTGAACACA TCAAGCACTC TGCTTGTCGT
CAAGAATTCT TGAACAGAGT CAAGTCCAAC GCTGCTGCTA AGAAGGAAGC CAAGGCCAAC
GGTCAACAAG TTCAATTGAA GAGACAACCA GCCAAGCCAA GAGGTTCCAG AATCATTACC
ACTGAAGGTA ACATTCCTCA AACCTTGGCC CCAGTTCCAT ACGAAACTTT CATTTAA
 
Protein sequence
YSRGYRSGTR YAFQRDFKKH GTIALSTYLK VYKVGDIVDI KANGAVQKGM PHKYYHGKTG 
IVYNVTKSSV GVIINKVVGH RYLEKRVNLR VEHIKHSACR QEFLNRVKSN AAAKKEAKAN
GQQVQLKRQP AKPRGSRIIT TEGNIPQTLA PVPYETFI