Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46510 |
Symbol | |
ID | 4839381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1051607 |
End bp | 1052083 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390696 |
Product | predicted protein |
Protein accession | XP_001385212 |
Protein GI | 126137377 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2139] Ribosomal protein L21E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TATAGTCGTG GTTACAGATC CGGTACTCGT TACGCTTTCC AACGTGACTT CAAGAAGCAT GGTACCATTG CTTTGTCCAC CTACTTGAAG GTTTACAAGG TTGGTGACAT TGTTGACATC AAGGCCAACG GTGCTGTCCA AAAGGGTATG CCACACAAGT ACTACCACGG TAAGACTGGT ATTGTCTACA ACGTCACCAA GTCTTCTGTC GGTGTCATCA TCAACAAGGT TGTCGGTCAC AGATATCTTG AAAAGAGAGT CAACTTGAGA GTTGAACACA TCAAGCACTC TGCTTGTCGT CAAGAATTCT TGAACAGAGT CAAGTCCAAC GCTGCTGCTA AGAAGGAAGC CAAGGCCAAC GGTCAACAAG TTCAATTGAA GAGACAACCA GCCAAGCCAA GAGGTTCCAG AATCATTACC ACTGAAGGTA ACATTCCTCA AACCTTGGCC CCAGTTCCAT ACGAAACTTT CATTTAA
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Protein sequence | YSRGYRSGTR YAFQRDFKKH GTIALSTYLK VYKVGDIVDI KANGAVQKGM PHKYYHGKTG IVYNVTKSSV GVIINKVVGH RYLEKRVNLR VEHIKHSACR QEFLNRVKSN AAAKKEAKAN GQQVQLKRQP AKPRGSRIIT TEGNIPQTLA PVPYETFI
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