| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46284 |
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| Symbol | MSW1 |
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| ID | 4839452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 867967 |
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| End bp | 869106 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390767 |
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| Product | mitochondrial tryptophanyl-tRNA synthetase |
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| Protein accession | XP_001384835 |
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| Protein GI | 150865566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.9476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.247243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATCC AATCCAAAGT CGTACTACTA CATAGGTTTG CCAGATCATA TGCAACTACA
GGTGGATCAA CTGTTCAACA TGTGGCAAAG TTCGAAGGGG TTCCTCCGCA ATCCACGATT
TTCTCGCTCA TTCAGCCTAC GGGAAATATC CACTTAGGTA ACTACTTAGG AGCCATTCGG
AGCTGGAAGG AACTTTCTGA GTCAGACTCT CCGGGTTCCA AGTTTATCTT TGGTATTGCT
GACTTACACG CCATCACTTT GCCTAAAGAT CCCCAGACCC TAAAAAGGTT CAGACATGAA
GCCATCGCCA GTTTATTGGC TTCTGGATTG AGTCCTGAGA AATGTACAAT TTTTCACCAG
TCTGCTGTTC CAGAACACAC CGAATTGTCA TGGTACTTCA CCTGTATCAC AAGTATGGGA
AATCTAAACA GAATGACACA ATGGAAACTG AAAGCTCAAC AAGTTCAAAA CAGTTCCATA
TATGACGATA GGGTAATGGA GGCTACTAAG GCAGGAGTGC TCTGCTATCC CATTTTGCAA
GCAGCAGATA TCTTGATATA TCGTGCCACT CATGTTCCAG TAGGTGACGA CCAAAGTCAG
CACTTAGAAT TGACTAGAGG CATAGCCAAT ACCTTCAACC ATACCTATAA AACGAAGTTC
TTTCCTATTG TAAAAACGTT GTTAACTCCT TCAAAGAAGA TCCTTTCTCT CAGAAATCCT
TCAAAGAAAA TGTCCAAGTC AGATCCAGAT CAAAACTCAT GCATCTATGT AACTGATTCA
CCTGAAATTG TAGCTAAGAA GATCAGAAAG GCTACCACTG ACTCTATTCA GGGCCCTATC
TACTATGCTC CAGAGGAAAG ACCTGGTGTA TCCAACTTGA TCAATGTAAT TTCTGGGTTG
ACCGGTAAAT CCATAGATGA AGTCGTGGCA GACTTGCATT GGGTCAAAGA TCACAAGCAG
TTCAAGGACC ATGTCACAGA GTTGATTGTA GAGGAGTTCC GAGAAAACAG AGAAATGTAC
CAGAGATTAA CGGCTGACAT CAGCTATCTT GACGAGGTGT GTGCTAGGGG AAGAGACAAT
GCTAGAGAAA TCGCCCTGGC CAACATCGCT CAAGTGAGAA AATTGATTGG AATGGATTAA
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| Protein sequence | MKIQSKVVLL HRFARSYATT GGSTVQHVAK FEGVPPQSTI FSLIQPTGNI HLGNYLGAIR
SWKELSESDS PGSKFIFGIA DLHAITLPKD PQTLKRFRHE AIASLLASGL SPEKCTIFHQ
SAVPEHTELS WYFTCITSMG NLNRMTQWKS KAQQVQNSSI YDDRVMEATK AGVLCYPILQ
AADILIYRAT HVPVGDDQSQ HLELTRGIAN TFNHTYKTKF FPIVKTLLTP SKKILSLRNP
SKKMSKSDPD QNSCIYVTDS PEIVAKKIRK ATTDSIQGPI YYAPEERPGV SNLINVISGL
TGKSIDEVVA DLHWVKDHKQ FKDHVTELIV EEFRENREMY QRLTADISYL DEVCARGRDN
AREIASANIA QVRKLIGMD
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