| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36316 |
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| Symbol | |
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| ID | 4839449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 858103 |
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| End bp | 858942 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390764 |
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| Product | predicted protein |
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| Protein accession | XP_001384832 |
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| Protein GI | 126136617 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5325] t-SNARE complex subunit, syntaxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.889727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCA ACAACGCCTT CGAAGCAGAT ATCGAGCGAA CCGCTTCGAA TCGATCCCAC
CAGTACAAAG ATTACCCGGA GTTCGAGTCT CTTTCCACAG CCATAGACAA CAGATTGCAT
CAGATAAATG GTACGCAGTT GCCTTCTATC AAAAAGCTAA TTGGCGACTA TGAGACCAAT
GCAGCAGACA CTGTAGGAGA AAGTGTTGGT AAAAATTTGA ACCAAGTAAC TGAGAATTTC
AAAAAGTTGA ATGAATCTAT AAAACAGCTT AACTCTATTA TTCAGCAGAT TGCATCCAAT
CACGAAGACA TAGAAGTGCT AAATTATCTC AAACAGAAGG AAAGCATCCA AATAAAGTTG
GTCAGAGACA GTTTGAACAC TTTCAAAAAC TACCAGAAGC GATTTGAGGC CGCTCAATAT
AAACATTTGC CTGAAGGGAG CAGCACAAAG CAAGAAATGT TAAGAGAAGT TGAAGAACAG
TCACAACTAC AAGGGCAGCA ACAAGTACAA ATTACTTATG AACCCGTTAA TGCTGAAGAA
TTGGAACAGC AGACGATTTT GGTGGAAGAA AGAGAACGCG AGATACACAG AATCCAACAA
GATACCGTAG AAATCAACGA GATTTTCCAA AATTTGTCTT CTATAGTAAA TGAGCAACAG
TTCCAGATTG ATAATATTGA AAGTAACTTG TTTAATTACA GCCAAGATGT TCGTGGAGCT
TCTAATGAGC TTAGAACAGC AGAAAGATAC CAGAGACGTT CTGGAGGCAG GATGTTGTGT
TGTTTGATGG TGTTGATCGC TGTAGCTGGT TTTATATTGG TAGTTGGAGT TTTGTTTTAG
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| Protein sequence | MSFNNAFEAD IERTASNRSH QYKDYPEFES LSTAIDNRLH QINGTQLPSI KKLIGDYETN
AADTVGESVG KNLNQVTENF KKLNESIKQL NSIIQQIASN HEDIEVLNYL KQKESIQIKL
VRDSLNTFKN YQKRFEAAQY KHLPEGSSTK QEMLREVEEQ SQLQGQQQVQ ITYEPVNAEE
LEQQTILVEE REREIHRIQQ DTVEINEIFQ NLSSIVNEQQ FQIDNIESNL FNYSQDVRGA
SNELRTAERY QRRSGGRMLC CLMVLIAVAG FILVVGVLF
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