Gene PICST_32504 details

Gene Information

• Locus tag: PICST_32504
• Symbol: NRG1
• ID: 4839209
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009045
• Strand: +
• Start bp: 1681560
• End bp: 1682336
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 12
• GC content: 46%
• IMG OID: 640390524
• Product: transcriptional repressor
• Protein accession: XP_001385015
• Protein GI: 150865691

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0168465
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTTTGTT CTCAACCTCA TACCAAATCA ACTTTGTCCA AGGCAGTAGA TGGGCAACCA 
TTGCCATCTT TCACTGAGTT GCTCACTTCA ATCCCATTAC CTAGTGAGTT TAAGGGTAAA 
AGTTCTGGAA GTTCTGCTAG CTCTACCGCC TCTAGTTCTC CTTACACTTA CTACTCGCCT 
GTGATGCAAA GAGCTGCGAG CCCTTTACAG GCAACCGTTG TGACGACACC ACCAGAATAC 
TACCCTATTT CGCAACAGCT GGTGATTATC CACCCCCACC CGGTGCTGGC CAACAACTAC 
CAATACTTGC AGTACCAATA TCAACCTTAT GATGGCCGCT CTGTGATGAC TCGCCCTTTA 
CTTAGTCCTC CTATCATGGA AGGCACAACG ATTCCTACAC CTCCATCTAG TTCGAACTCT 
CACAGAACTA TACGATCTTC CAGCCCCAAT AGTACTGCCT CTTCACCTGG TGACGCTACT 
TCCCCTAGTG CTCACATGGC CCTCATCTCA GAGCCAATCG CTGTGTTGAC TGCAGACCCA 
AAGCGTAGAC ACATCTGTAA GGTGTGCGCT CGTTCTTTCA CTACATCTGG TCATTTGGCT 
AGACATAACA GAATTCATAC CGGTGAAAGA AAGCATGTTT GTCCTTGGCC TACATGTGAT 
GCTAGATTCG CTAGACAAGA TAATTGTATG CAACACTACA AGACACACAC CAACGGTAAA 
AACAAGAGGT CAAAGTTGAG CTTCAAGACC AAGTTGAATC CAAAGTCATT CACTTGA 

 

Protein sequence

MLCSQPHTKS TLSKAVDGQP LPSFTELLTS IPLPSEFKGK SSGSSASSTA SSSPYTYYSP 
VMQRAASPLQ ATVVTTPPEY YPISQQSVII HPHPVSANNY QYLQYQYQPY DGRSVMTRPL 
LSPPIMEGTT IPTPPSSSNS HRTIRSSSPN STASSPGDAT SPSAHMALIS EPIAVLTADP 
KRRHICKVCA RSFTTSGHLA RHNRIHTGER KHVCPWPTCD ARFARQDNCM QHYKTHTNGK 
NKRSKLSFKT KLNPKSFT