| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32483 |
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| Symbol | |
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| ID | 4839265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1621846 |
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| End bp | 1623813 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390580 |
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| Product | predicted protein |
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| Protein accession | XP_001385007 |
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| Protein GI | 150865684 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00583] DNA repair protein (mre11) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0241733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.371537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCTG TTGACAAGAT ACCCGAGGGA GAGGACACTA TACGAATCCT TCTCACCACA
GACAACCATG TTGGCTACAA CGAGACAGAT CCAGTGCGAG GAGACGATGG CTGGAAGACC
TTTCATGAGA TCACCAGACT CGCAAAGCAA TTAGATGTAG ACATGATAGT CCAGGGTGGC
GACTTGTTCC ATATCAACAA ACCGCTGAAA AAATCTCTTT TCCACGTCAT GAAGTCCCTT
CGTTTGAATT GTATGGGAGA CCGTCCCTGT GAATTGGAGC TTCTCAGTGA TCCTACACAA
GCTTTGGATT CTGGCTTTGG CACCGTCAAC TATGAAGATC CAAACTTGAA CATCTCTATT
CCCGTCTTTG CTATCAGTGG TAACCATGAC GATGCTACGG GCGAAGGGTT GTTGCTGCCT
CTTGACATTC TTCTGGTTTC TGGACTAGTG AACCATTTCG GTAAGATTCC AGATAGCGAG
AACATCACCG TTTCGCCGTT GCTTTTCCAG AAGGGCCGAA CAAAACTAGC TCTTTACGGT
ATGGCAAATG TTAGAGACGA AAGGCTCCAT CGAGCTTTTC GTGATGGACA TGTGAAATTC
CAGAGACCCA ACATCCAGAC AGACCAATGG TTCAATTTGT TTTGTATTCA CCAGAACCAC
GCCCAACATC TGATAACATC ATCAATTCCC GAAATGTATT TGCCCAACTT CTTAGACTTT
GTACTTTGGG GCCACGAGCA CGAATGTATA GCTTACCCTG TTCATAATCC AGAGACTGGC
TTTGATGTTC TTCAGGCTGG ATCCTCGGTA GCGACTTCGT TATCCGAAGG CGAAGTAGCT
GATAAACACA CGTTTTTGTT GAGTATCCGC GACCAGAGAT ATTCTATAGA ACCAATAAAG
TTGAATACAG TGAGACCATT TGTGTTAAAG GAAATTGTCT TGCTGCAGAC AGATCTCATA
CTGGGAGCTG CCTCGAAGTC AGACGTAATA GCACTTCTAC TGCAAGAAGT GGAAAGCTCC
ATAGTGAAAG CCAATGAAAA CTTCAAACAA AATAACGCCG AACTCTTCGA TGAAGACGAT
ACAGAAGAAG ATGTAGCAAA AAAGATCCCC TTGCCTTTGA TAAGAATCAG AGTAGAATAT
TCAGGAGGTT ACGAAATTGA GAACACAAGA AGGTTTTCCA ACCGGTTTGT AGGAAAAGTT
GCTAATCCCA ATGATATCAT CCAATTCTAC AAAAAGAGAA CATCAGAAAC AGGACCCAAA
AAAACGAAGT TTCTGGATAA GGATCTTCTT GAAGAAGGGG AGTCCAACAA GAAGTCTACT
GAGATACAAC TACAAGATCT AATAGAGAAA TTCATCAGTG TGGCAGATTT GTCACTCTTG
CCGGAGGCTG GGATGAACTA CGCTGTCAAG AGATATATCG ATAATGAAGA CAAGCATGTC
CTACAAAATT ATATTGAAAA CGAAATCAAG AAAGAGACAG AGATGTTAAT GAAGATAGAC
ATCGAGGACA CAAGCGTCTA TGATAAGGAT AACGACTATT CCAAAAAGAT ATTCAGACAG
CTTTTGTCTC AAATCAAATT AGAGAATAAG AAGATTGACC ACGAGTCCAT GGACTTTGAC
ATGGAGCCTA GCCTTTCGAC AAAGAAAGCA GCACCGAAGA GGAACACAAA AAAGACAAAA
CGAAGCGAGG AAATCGTAGT TTCTGAAGAT GAAGATGACG ATTTTCAAGA AGAAATTGAA
GAGAAACCTG CTGCACGAAA AAAAAGCGGA AGGAATACAA AAGCAAACAA GAAAGAAGAG
ATTATCAGCG ACAACGACGA CGATATAATA GATCTGGATT TAGATGAAGG GCAACAACAA
ACAACAAGAA GAGGTGGACT GGCGCCGCGT GCTAAGAGAG TATCTACCAG CAGTCGTGGC
AGAGGAAGAA AGACATCTTC ATTGAAAGAC AGTGTGATGA ATTTGTAG
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| Protein sequence | MPPVDKIPEG EDTIRILLTT DNHVGYNETD PVRGDDGWKT FHEITRLAKQ LDVDMIVQGG
DLFHINKPSK KSLFHVMKSL RLNCMGDRPC ELELLSDPTQ ALDSGFGTVN YEDPNLNISI
PVFAISGNHD DATGEGLLSP LDILSVSGLV NHFGKIPDSE NITVSPLLFQ KGRTKLALYG
MANVRDERLH RAFRDGHVKF QRPNIQTDQW FNLFCIHQNH AQHSITSSIP EMYLPNFLDF
VLWGHEHECI AYPVHNPETG FDVLQAGSSV ATSLSEGEVA DKHTFLLSIR DQRYSIEPIK
LNTVRPFVLK EIVLSQTDLI SGAASKSDVI ALLSQEVESS IVKANENFKQ NNAELFDEDD
TEEDVAKKIP LPLIRIRVEY SGGYEIENTR RFSNRFVGKV ANPNDIIQFY KKRTSETGPK
KTKFSDKDLL EEGESNKKST EIQLQDLIEK FISVADLSLL PEAGMNYAVK RYIDNEDKHV
LQNYIENEIK KETEMLMKID IEDTSVYDKD NDYSKKIFRQ LLSQIKLENK KIDHESMDFD
MEPSLSTKKA APKRNTKKTK RSEEIVVSED EDDDFQEEIE EKPAARKKSG RNTKANKKEE
IISDNDDDII DSDLDEGQQQ TTRRGGSAPR AKRVSTSSRG RGRKTSSLKD SVMNL
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