| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32401 |
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| Symbol | BPT1 |
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| ID | 4839600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1421498 |
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| End bp | 1426219 |
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| Gene Length | 4722 bp |
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| Protein Length | 1573 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390915 |
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| Product | ATP-dependent transporter |
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| Protein accession | XP_001385276 |
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| Protein GI | 150865884 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.375187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAA TCACACATTT GTGGTTGCTG AAGCTAAACC CTCTTGGTTC TGTTCACATT
GTTGGCCATG AATTGATTGT TGGCCTCGAA TCGTTGTACA AAATAGAACT GCCAGGTTGG
ACTTCTCCAT TGTACTCACC CAGTGGAAAC GCATTGAATC CACTTTTCGT CAAAAAAGTT
TCCTTGTATG TCAAGCTTGT TTTCGTCGCT TTACTTATCT TGCAACTCGT GGCAGCACTC
CTTACACCCA CAAAGAAAAT CACAAAGACG TATACGCAAA TCGGTTTTCC TACTAAATTT
GCAGTAATAA GCTTGCAAGC TCTTGCCACA TTGGGCATCT ACGTCCTGTC TCATGATCTC
AATAACATCG TCCACTTTGC TACATTGCTG TTGTTGGTAC TTCCCTTGCA ATTGATTGCA
CCCAGAAAGT CACCAGTTTC TTATGGTGTA GTATTATTCT TCTGGTTGCT GACAATTGTC
TTGTTCGTAG TTCCAACCAT TCAAGATACT TTTTCGACAA TCACAATCTA CCGGACCTCG
ATATTCTCAT ATGGTTGCGA AATATGCGTT GCCTTAACAT CGATTGTCTT GTTCTTTCTA
GATAATGCTC ATTATCATAC CTTGATTGAA CTGGAAACGG ACCCTTACAA CACCTACAAT
ATCCTCTACT ATTTGACCTT CCAGTGGGTC CAGCCTCTTA TCACGACGGC TTACACCGGC
GAGCTTACTA AAGAAGATGT CCCAAATACC TCGGCTCACT TGGCTTGCGA AATTACTCTC
AAATCCTTAT CTAAAAATTG GGAACAAGAG GTAAAAGCAA CTGCAGAAAA AAGCTGGTTC
ATTCCTGAAA AGTTCAGATT TGGCCCTTCG CTAGTGAAAG CGATCTTTAA GTCGTTCTTG
TATTACTTTG CAATTAACCT TAGTCTTGAT CTTATGGAAA CAACCTTGAC CTTTTCTCAA
CCTATTGTAT TACGCCAGTT AATCATCTAC GTACAAGAAC ACAGCAGCGC AGAAGACAAG
CCTCCTATCA TCATTGGTTA TGGTCTCGCC ATCTTGTTAT ATGCCATTAA CTGTACAAGG
TTTTTTGTAA TCAACCAAGC ATTTAAGTAC CAATATGAGT TCCAGAATGC AGTACATTCG
TCACTTGTAG CGATTATTCA TACTAAGTCG TTAAGGTTAT CTCCTGATTC CAAGAAGGCA
AAGCCTACTG GTGACATAGT AAACCATATC TCAATTGATG TTGGAGCCAT TAATGGGTTC
TTCTCTAGTT TGCTGGGCTT TGTTAGCTCA CCCTTGAAGT TGATTTTCTG TTTGGTGTCC
TTGTGTAGGC TACTAGGCAA TGCTACATGG GCAGGTATGC TTGGCTTCGT GGCAGTATTG
CCTTTTTCAG TTGTTTTGTT CATTGTTTTT GCCAACTGCC AAAAGAATTT AATGAAATTC
ATGGATGAGA GAGCTAACTT AACAAATGAC ATTCTAACGT CCATCAAGAA TATCAAGCTA
TACTCGTGGG AAAAACCAAT GTTGAAAAGA TTGACAGAGA TTAGAGATCT GAAAGAATTG
AATGAGCTTA AAAAGATAGG AGTTATTATG GCTGCTGTTC AGTTTATTTG GGGTTGTGTT
CCATTCTTGA TCAGTTGCTC TGTTTACACT GCTTTCACTC TTTTCTACGA CATCCCTTTA
ACTGCTGACA TTGTTTTCCC ATCATTGGTT CTCTTTGATC TTCTCTCTGA ACCATTGTTG
GAATTACCAA TGTTGATTTC TCATTATACT AGTGCTGCTG TCTCTTTTGG TAGAATCAGT
GATTTTCTCT TACTTGATGA GCTTGACTTG GATAATAGCA AATCGTATAG CCACAGACTT
AGCTCAACTT CTAACTCGAT TCCAGTTAAG CTTGAAAATG TCACTTTGTT ATGGTCTACA
AAAGAAGGCG CAAACAAAAA GTTTCACGAT GAAGAGTCTC AGGTTGAAGA AACTCATAGC
AATGTTGCTT TGTCTGACAT TAACATTACT GCCGAAGCCG GAAACTTAAC GTGTATTGTA
GGAAAAGTTG GAAGTGGGAA AACCACTCTT ATCAGATCTA TCTTGGGTGA AATTCCTATT
CATACACAAC CTTACTCTGA TGATTCAGAA TATGCTCCTA GAGTTGAGGT AAATGGTACA
ATCGCCTACT GTCCCCAAAC TCCATGGATT TTGAATGGTA CCGTTAAAGA GAATATTTTG
TTTGGCTACA GATATAATGC TGCCAACTAC AAGAAGGCAA TTGAAGCCTG TGAGCTAGTC
AGTGATTTCC AATCTTTAGC TGATGGTGAC AAGACTGTTG TTGGAGAAAA GGGTATTTCT
TTGAGTGGTG GACAAAAAGC TAGAATTTCG TTGGCTCGTG CTGTTTACTC AGGGGCTGAC
ATCTATCTTT TAGATGACGT TCTTTCTGCT GTAGATGCCC ATGTTGGAAA GAAAATCATT
GACAATGTGT TAGGCAGAAA TGGTGTTCTC GCTTCAAAAA CGGTCATTTT GGCTACAAAC
TCTGTTCACA TTTTACACGA AGCTCACAAC ATTTACTTGT TGAAGAACGG AACCATTAGT
GAGAGTGGTG ACTATGATAC TGTCGTGGAA AGACAGTCTG ATTTGGCTGA ATTGTTAGAA
GAGTTCGGAA AAGGGAAGAA TTCCCAAGAA ATCGAAACTG AACCTGAAGA GGTGGCCAAA
CAAGCCCCCG TGAACTCGAA ACAACCAGAA ATAGATACCC TTGATGTCGA AGAGGAAATA
ATTGAGTATG TATCTGAAAG TATTGATCCC GATCAAATAG ACGCTCGTGG CCTTCGTCGT
GGAAGTTTGG TTTCATTTGG ACACGAATAC ACAGATGAAG AAGACGATAG TCCAGTTAGA
AAAACCGGCA ATACAGAGGA GAAGCTTGGG AAGGGTCAAG TTAAGAGAGA TACTCTTTTG
GGTTATCTAA AAGCAGCAGG TTACAAGTAC ATCATACTCT ACTTGATTTT GTCTACTGGT
ACCTACTTGT GTTCTATGCT AGATAAACTT GTTTTAACAA GTTGGTCGGA GAAGAATAGT
GCTTCTGGAG GCACAGTTAA TCCACACTTC TATTTAGCTC TCTATGGAAT TGTTGGAATA
CTGGGTGGGG GTTTTGTATT GCTTAGTTCT GTTGTCCTTT GGACATGCTG TATTGTTCCT
GCTTCATCGT TCTTCCACGC CAGACTAGCC AAATCAGTCT TGGCTTCTCC AATGTCTTTT
TTCGAGACAA CTCCGGTGGG AAGAATCTTG AACCGTTTTA CACAAGATAT TGCAAGTCTT
GATATCCAGA TTCCCATGGT CTTGATTAGT TTTGCTCTAC AGCTTCTTAG TGCGTTTGTC
ACATTTGGGG TAATCATTTC CGTAGTTCCA ACTATCATCT TCTTCCTTGT GCCTATGTCT
TTTATTTACA ATTACATTCG CCAACTTTAC ATTCCTGCCT CAAGAGACCT CAAAAGAATC
GAAAGTGCTT CGAATAGTCC TATTATATCT ACGATACAAG AGTCGCTTAA TGGTGTTGAT
ACCATCAAAG CTTTCAATCA AGAGGATAGA TTCACCCATA TAACAAGAGA TGCGGTTGAT
GAGTCTATAT CTGTAGGTTT GATTATCGTG GGAATCCAGA GGTGGATTTC GATCAGATTG
CAGTTCATTT CGTCTACAAT TTTATTCCTT ACTACTGTAT TAGCTTTGAC AACGTTGACT
ACCAGCACTC CTATGAACTC CTCAGTCTTT GGTTTTGTCA TGTCGTATGC CATGAATACA
GTTCTGGTGT TGAATGCAAT CGTGAGAACT TGGGCTGAAG CTGAAACTGT GATCGTTTCA
TTAGAAAGAC TCAATGAGTA CAGCGAGCTT CCTTCAGAGG CACCAATGGA GATAGCAGAC
AAGAAACCAG CTGAAGGCTG GCCAGAACAA GGAACCATAT CTTTCAACAA TTATTCTGTT
AGGTACAGAG AGAACTTAGA TCTTGTCCTT AAAGACATTA ACATTAGCAT CAATGCTAAG
GAAAAGATAG GAGTTGTGGG AAGAACTGGT GCTGGCAAGT CTTCGCTCAC TTTGGCATTG
TTCAGAATCA TTGAAGCTGC TTCCGGTAAT ATTACAATCG ATGGAGTTAA TATCAATGAA
ATCGGATTGT TTGATTTAAG ACATCACCTT ATAATTATTC CTCAAGATTC CAGTACTTTC
AGAGCTTCTG TAAGAGAAAA TTTAGATCCG TTTGGCGAAC ACTCAGATGA GCAATTATGG
AAGGTTTTGG AAGCTGCTCG CTTGAAAGAG CATGTGGAAA AGATGACAAC AGAACCAACG
GAACAGGAAA AGAAAGAAAG TAAAAATGCA GAGGAGTTAG GAACTTACAG AGGATTGGAT
GCCAAGATTG CCGAAAATGG TTCTAATCTT TCAGCCGGTC AGAAGCAATT GTTATCTTTA
GCCAGAGCTC TCCTCAACGA CACCAGCAAG ATTTTGGTCC TTGACGAAGC AACTGCCGCC
GTAGATGTAC AGACTGACAA AATCATCCAG CAGACCATCA GGAAAGAATT CAAAGACAAG
ACTATAGTTA CTATCGCTCA TAGATTGAAT ACTATTATGG ACAGTGACAG AGTTTTGGTT
TTGGACAAGG GTGAAGTTAA GGAATTTGAT GCACCAGATA AGTTGAAGGA GAACAAAGAT
GGTATCTTCT ACTCCCTCTG CAAAGAAGGT GGTTATATTT AA
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| Protein sequence | MDSITHLWLS KLNPLGSVHI VGHELIVGLE SLYKIESPGW TSPLYSPSGN ALNPLFVKKV
SLYVKLVFVA LLILQLVAAL LTPTKKITKT YTQIGFPTKF AVISLQALAT LGIYVSSHDL
NNIVHFATLS LLVLPLQLIA PRKSPVSYGV VLFFWLSTIV LFVVPTIQDT FSTITIYRTS
IFSYGCEICV ALTSIVLFFL DNAHYHTLIE SETDPYNTYN ILYYLTFQWV QPLITTAYTG
ELTKEDVPNT SAHLACEITL KSLSKNWEQE VKATAEKSWF IPEKFRFGPS LVKAIFKSFL
YYFAINLSLD LMETTLTFSQ PIVLRQLIIY VQEHSSAEDK PPIIIGYGLA ILLYAINCTR
FFVINQAFKY QYEFQNAVHS SLVAIIHTKS LRLSPDSKKA KPTGDIVNHI SIDVGAINGF
FSSLSGFVSS PLKLIFCLVS LCRLLGNATW AGMLGFVAVL PFSVVLFIVF ANCQKNLMKF
MDERANLTND ILTSIKNIKL YSWEKPMLKR LTEIRDSKEL NELKKIGVIM AAVQFIWGCV
PFLISCSVYT AFTLFYDIPL TADIVFPSLV LFDLLSEPLL ELPMLISHYT SAAVSFGRIS
DFLLLDELDL DNSKSYSHRL SSTSNSIPVK LENVTLLWST KEGANKKFHD EESQVEETHS
NVALSDINIT AEAGNLTCIV GKVGSGKTTL IRSILGEIPI HTQPYSDDSE YAPRVEVNGT
IAYCPQTPWI LNGTVKENIL FGYRYNAANY KKAIEACELV SDFQSLADGD KTVVGEKGIS
LSGGQKARIS LARAVYSGAD IYLLDDVLSA VDAHVGKKII DNVLGRNGVL ASKTVILATN
SVHILHEAHN IYLLKNGTIS ESGDYDTVVE RQSDLAELLE EFGKGKNSQE IETEPEEVAK
QAPVNSKQPE IDTLDVEEEI IEYVSESIDP DQIDARGLRR GSLVSFGHEY TDEEDDSPVR
KTGNTEEKLG KGQVKRDTLL GYLKAAGYKY IILYLILSTG TYLCSMLDKL VLTSWSEKNS
ASGGTVNPHF YLALYGIVGI SGGGFVLLSS VVLWTCCIVP ASSFFHARLA KSVLASPMSF
FETTPVGRIL NRFTQDIASL DIQIPMVLIS FALQLLSAFV TFGVIISVVP TIIFFLVPMS
FIYNYIRQLY IPASRDLKRI ESASNSPIIS TIQESLNGVD TIKAFNQEDR FTHITRDAVD
ESISVGLIIV GIQRWISIRL QFISSTILFL TTVLALTTLT TSTPMNSSVF GFVMSYAMNT
VSVLNAIVRT WAEAETVIVS LERLNEYSEL PSEAPMEIAD KKPAEGWPEQ GTISFNNYSV
RYRENLDLVL KDINISINAK EKIGVVGRTG AGKSSLTLAL FRIIEAASGN ITIDGVNINE
IGLFDLRHHL IIIPQDSSTF RASVRENLDP FGEHSDEQLW KVLEAARLKE HVEKMTTEPT
EQEKKESKNA EELGTYRGLD AKIAENGSNL SAGQKQLLSL ARALLNDTSK ILVLDEATAA
VDVQTDKIIQ QTIRKEFKDK TIVTIAHRLN TIMDSDRVLV LDKGEVKEFD APDKLKENKD
GIFYSLCKEG GYI
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