| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32278 |
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| Symbol | YKH1.1 |
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| ID | 4839714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1108581 |
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| End bp | 1109348 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391029 |
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| Product | putative short chain dehydrogenase |
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| Protein accession | XP_001385222 |
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| Protein GI | 150865841 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAG GAAAGACTTA CTTTATCTCA GGTGCAAACC GAGGAATTGG CTTTGAATTG
GCCAAACATT ACCTCGAAGC CAATCCAGAC AATATCGTTT TAGCCACTGC AAGATTTCCA
GCTTCTGCTA CGGCTTTGAA TGAATTGGCT GTGAAGAATT CCAATCTTCA CATTCTCAAG
TTGGATGTCT CTGATGAAGC TTCTATTGCA AGCATTGACT CGCAATTAAA GGATATCACG
GATGGTGTGG ATGTTTTTGT TTCGAATGCA GGTATCTTTC TGGAATCCCG TGGAACGGTC
CTTAGTACCC CAGCCGAAAA ATGGGATAAG CACTTGAAGG TTAATACTGT GGGTCCAATT
CTTCTTTTCC AGGCATTGTA CCCTTACTTA ACTAAAAGAG TTACCAAGAA AGTGGTCTTT
ATATCTTCGT TGGCAGGATC TATTGCCAGT TTTAATCCAG CGTTCCCAAT GGATTCATAT
GGTCTTTCAA AGACAGGACT TAGCTTTATC GCCAAAGCAG CTGGGGCCGA ACTTGCTCTG
GAAGGCTTCA TCGTCATTGC AGTTCATCCA GGTGTCGTCC TGACCGAACG AGCATCAAAG
TCCATGGATG AAATGAAGGC ATCAAACGAT GAAGTTGCTG CCTTCCTCGA TCTGTTGATG
ATTACTCCAG AAGAGAGTGC TTCCTTTTTG TCCAAGTTAA TTGAGGAGTT GAATGAAGAG
AAGAACGGGT CTTTCCTTAA TTATGACGGA AAAACTCTCC CATATTAA
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| Protein sequence | MTTGKTYFIS GANRGIGFEL AKHYLEANPD NIVLATARFP ASATALNELA VKNSNLHILK
LDVSDEASIA SIDSQLKDIT DGVDVFVSNA GIFSESRGTV LSTPAEKWDK HLKVNTVGPI
LLFQALYPYL TKRVTKKVVF ISSLAGSIAS FNPAFPMDSY GLSKTGLSFI AKAAGAELAS
EGFIVIAVHP GVVSTERASK SMDEMKASND EVAAFLDSLM ITPEESASFL SKLIEELNEE
KNGSFLNYDG KTLPY
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