| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31983 |
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| Symbol | RAD18 |
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| ID | 4839641 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 395624 |
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| End bp | 397093 |
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| Gene Length | 1470 bp |
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| Protein Length | 474 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390956 |
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| Product | DNA repair protein and ATPase |
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| Protein accession | XP_001384734 |
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| Protein GI | 150865495 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5432] RING-finger-containing E3 ubiquitin ligase |
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| TIGRFAM ID | [TIGR00599] DNA repair protein rad18 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.812011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA ACCCGTTCGA TCGGTTTGGA GTTGATGTGA CTGATCCTAC AGACTGGGCT
TCTACAAAAC TACCTCGTTT AAGTGAATTG GATTCGTTAA AGCGTTGCTA TATATGTAAG
GAATTCTTCA CGGCGCCTGT ACTCACAGTG TGTCACCACA CGTTCTGTTC ACAATGTATA
CGGCAGTATT TGCTCACCAA TAGTCACTGT CCGTTATGCA AAACTGAGCT CTATGAGAGT
AGTTTAAAGC GAGATATGCT TTTGGATGAA ATAGTGACAT GTTACAAGAG TCTACGTCCA
TTCTTGCTAA ATCTTTTACG TGAGAACGAA ATCCTTGTGA AAAATGAACC AGGTGTGAAA
AAGACTGAAA AAGAAGATGT AAATTCTAAA GCTACAGATA TTGAGAAATC TGAGAATGGG
CCTTCAAAGA GTAACAAAAG ACCGGCTCCT GTTGATGAGG ATGATGTTAT AGAAGTTCTT
TCACAAGGTG AGAGTGTGCC GAGTGGCAGC TCTACACCTG AGGCTCAACC TAAGAAGAAG
ACAAAACCAG AATCTCAGTT GCCAGCTTTG CCTGGAAAAC TGGATCAAGT AGCATGTCCA
ATATGTAACA AGATGATGTC TGCTGACATT TTGCAAACAA GACATCTAGA CGACTGTCTC
AGTGGGAAAA CGACTCCACC AAGTAGCAAT GGTTCACATC TGCGGAAGAA AGCCGGTGCT
AGTCACGGAA TAGCTTCATT CTTCAAGAAG GAGTCACCAG TACCGTCCTC TTCTTCATCT
TCGCCTTCAA CATCAAATTC TGCATTTTCT AAAGCTGAAA TTCTGCAACC GGTAGGATTC
AAGGAGTCAT ACTTGAAGCA GGTTGAAAAG ACGAATTCAG AGTCTGTCAA GAAGCTTCCA
AAACTTGACT TCCAGTCCTT GTCTACTCCA AAACTAAAAG AGAAGCTTGC TGCCTTGAAT
CTAAAGGTTC AGGGATCCCG ATCTCAGTTG GAGATGCGCT ACAACCAATT CTATGTACTC
TACAACTCGA ATCTAGATAG CAGCCGACCC GTCCTGGAGA AACAATTGAA GCTGACATTG
AATAAATGGG AACAACTGCA TCTGGCATTT AATACCGAAT CTTCCACGTT GTTCTCCAGT
AGAGCCTCAA TTAGCAACAG GTCAATTACA TCCAAGACGT TTCTGGTCCG GGAGTGGCTT
CAAGTGTATC ATCAGGAATT TAGGGAGTTG ATCCGTGCGG CGAGAGCATC GGCTAAGAAG
GATAAGAAAT CCAAAGCAAA AAATACCATA GACGTTATAG AAGAAGCTGA ATACGTCGAA
GTCTCAAAGA AGGATGACTC AAGACCTCAA CAAGAACACG GTTCCACGGA AAGCAAGGTT
CCACAGTTAA CTCCGGAATT GGACATGGAA TTGGTGGATA TGGATTTTGC AGACGATATC
GCCAACAGTC TGTTGTTTGG AGGAACGTGA
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| Protein sequence | MSKNPFDRFG VDVTDPTDWA STKLPRLSEL DSLKRCYICK EFFTAPVLTV CHHTFCSQCI
RQYLLTNSHC PLCKTELYES SLKRDMLLDE IVTCYKSLRP FLLNLLRENE ILVKNEPDIE
KSENGPSKSN KRPAPVDEDD VIEVLSQGES VPSGSSTPEA QPKKKTKPES QLPALPGKSD
QVACPICNKM MSADILQTRH LDDCLSGKTT PPSSNGSHSR KKAGASHGIA SFFKKESPVP
SSSSSSPSTS NSAFSKAEIS QPVGFKESYL KQVEKTNSES VKKLPKLDFQ SLSTPKLKEK
LAALNLKVQG SRSQLEMRYN QFYVLYNSNL DSSRPVSEKQ LKSTLNKWEQ SHSAFNTESS
TLFSSRASIS NRSITSKTFS VREWLQVYHQ EFRELIRAAR ASAKKDKKSK AKNTIDVIEE
AEYVEVSKKD DSRPQQEHGS TESKVPQLTP ELDMELVDMD FADDIANSSL FGGT
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