| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89386 |
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| Symbol | LYS22 |
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| ID | 4838559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1461652 |
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| End bp | 1463185 |
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| Gene Length | 1534 bp |
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| Protein Length | 419 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389874 |
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| Product | homocitrate synthase |
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| Protein accession | XP_001384581 |
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| Protein GI | 126136114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02146] homocitrate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.249827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTCTTTCT TGTTTCACAT CTATATATTC AAGTACGAGC CATGTCTTCC GCATCCCCAT
ACGGTCCTAA TCCCTCTGAC TTCCTCTCTA ACGTTAACAA GTTCGAGGTC ATTGAGTCGA
CCTTGAGAGA AGGTGAACAG TTTGCCAATG CCTTCTTCAC CACCGAAAAG AAGATTGAGA
TTGCCAAGGC CCTTGACGAT TTCGGTGTCG ATTACATCGA ATTGACCTCT CCTGTTGCTT
CTGAACAGTC CAGAAAGGAC TGTGAAGCCA TCTGCAAGTT GGGACTCAAG GCCAAGATCT
TGACCCACAT TAGATGTCAC ATGGACGATG CCCGTGTTGC TGTTGAGACC GGAGTTGACG
GTGTGGATGT CGTCATTGGT ACTTCTCAAT TCTTGAGAAA GTACTCCCAC GGTAAGGATA
TGAACTACAT TGCCCAGTCT GCCATTGAGG TCATTGAATT TGTCAAGTCC AAGGGTATTG
AAATCAGATT TTCGTCTGAA GACTCGTTCA GATCAGACAT TGTTGATTTG TTAAACATCT
ACCGTACCGT CGACAAGATT GGTGTCAACA GAGTCGGTAT CGCTGACACT GTCGGATGTG
CCAACCCTCG TCAAGTGTAC GAGTTGGTCA AGACGTTGAA GTCTGTTGTC TCGTGTGACA
TTGAGTGTCA TTTGCACAAC GATACTGGAT GTGCTGTGGC TAACGCCTAC ACTGCTTTGG
AAGCTGGTGC CAAGTTGATT GATGTCTCTG TGTTGGGTAT CGGTGAAAGA AACGGAATTA
CTCCATTGGG TGCTTTGATG GCCAGAATGA TCACTGCTGA CAGGGACTAC GTTTTGTCCA
AGTACAAATT GCATAAGTTG AGAGACTTGG AGAACTTGGT AGCTGATGCT GTGCAAGTCA
ACATTCCTTT CAACAACCCT ATCACCGGAT TCTGTGCCTT CACTCACAAG GCTGGTATCC
ACGCTAAGGC TATTTTGGCT AACCCATCTA CCTACGAAAT CTTGAACCCA TCTGACTTCG
GTTTAACCAG ATACATTCAT TTCGCCAACA GATTGACAGG GTGGAATGCT ATCAAGTCCA
GAGTTGACCA GTTGAATCTC CATTTGACTG ATGACCAATG TAAGGAAGTC ACTGCCAAGA
TCAAGTTGTT GGGAGACGTC AGACAGTTGA ATATCGACGA CGTCGACTCC ATCATCAAGG
ACTTCCACGC CGACTTAGGC ACTCCTTCCT TGAAGCCTGT GCAGACCAAT GACAAGGACG
TCAGCGAAGA GCCAGCTGCT AAGAAACAAA AATCAGAATA AATGAACGGC AAGTATCTTT
TACTCTGATT TTTGTGTAAA CTAAACTACG AACAAGACCT CGGGCGTCTG GTTTGTTTGC
ATTTGGGGAG ACCTGGGGTT CTGGGTCTTC ATTTACACGA GTCATGACAA CAAAATTAAA
AGTTGAAAAT TCTAAAAAAA ATTGACATTC TGATTATATG TTTTACTTCT CCTTGGCCTC
TGGCATTATC TATTTATTTA ATAAAAGATA CTTG
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| Protein sequence | MSSASPYGPN PSDFLSNVNK FEVIESTLRE GEQFANAFFT TEKKIEIAKA LDDFGVDYIE
LTSPVASEQS RKDCEAICKL GLKAKILTHI RCHMDDARVA VETGVDGVDV VIGTSQFLRK
YSHGKDMNYI AQSAIEVIEF VKSKGIEIRF SSEDSFRSDI VDLLNIYRTV DKIGVNRVGI
ADTVGCANPR QVYELVKTLK SVVSCDIECH LHNDTGCAVA NAYTALEAGA KLIDVSVLGI
GERNGITPLG ALMARMITAD RDYVLSKYKL HKLRDLENLV ADAVQVNIPF NNPITGFCAF
THKAGIHAKA ILANPSTYEI LNPSDFGLTR YIHFANRLTG WNAIKSRVDQ LNLHLTDDQC
KEVTAKIKLL GDVRQLNIDD VDSIIKDFHA DLGTPSLKPV QTNDKDVSEE PAAKKQKSE
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