| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89181 |
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| Symbol | TUB1 |
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| ID | 4839025 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 905985 |
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| End bp | 908041 |
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| Gene Length | 2057 bp |
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| Protein Length | 448 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390340 |
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| Product | Tubulin alpha chain |
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| Protein accession | XP_001384126 |
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| Protein GI | 126135204 |
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| COG category | [Z] Cytoskeleton |
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| COG ID | [COG5023] Tubulin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.186445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.168385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TACATCCATA ATGAGAGAAG TCATCAGTAT CAATGGTATG TATGATCTGG AGAGTTTTCC
GGAAAGCTGA ATGCGATTGT GGCCCGGATC GGTTGAAATC CGATTATGAG ACAGATACGT
AACATGTTAC GATTGGAGGC AAGAAATGAA GACAACAGAG GAAACAAAAA GACAAAGTGA
ATGACAGAAG CGAAATTAAT AATGTCAATG TAGAAATTCA AGTTGAATGA GTCAACAGTG
AGTTTCGAAT GAATCTTAAT TGTCATTCGG ATGATGTTTG GTGGTAGAGT TAGAAGAATG
ACAAACGGGC AATACAGGAG TACCAGATTA CAAATATATC TATTATTCCC TTGCTATGAT
ATATTAGCAA TACTATGAGC CAGAATTCTA TCATAATTAC CGTTATTCCA CTAGTATCAC
ATCATTTCTA TCGTTTCAGT ATCGTTACCA ATCTTCTCGT ACATTTCACA TTTTGATCAA
CTCTAACCAC CCTTCTAGTC GGTCAAGCCG GTTGCCAGAT TGGTAACGCA TGCTGGGAAT
TATACTCCCA GGAACACGGA ATCAGACCTG ATGGTTACTT ACAAGAAGGT TTAGACAGAC
CTAAAGGGGG CGAGGAAGGC TTTTCAACCT TTTTCTCTGA AACCGGCTCC GGAAAGTACG
TTCCTCGTGC TTTATACGTA GACTTGGAAC CCAACGTCAT TGACGAAGTC CGTACCGGTA
AGTACAAGGA CTTGTTCCAT CCTGAGCAGT TGATTGCTGG TAAAGAAGAT GCCGCCAACA
ACTACGCTAG AGGTCACTAC ACTGTAGGCA GAGAGATCTT GGACGACGTT TTGGAAAGAG
TCAGAAAGAT GGCTGATCAA TGCGATGGTT TGCAAGGTTT CCTCTTTACC CATTCTTTGG
GTGGTGGTAC CGGTTCCGGT TTAGGTTCGT TATTGTTGGA GCAATTGTCG ATCGACTACG
GCAAGAAGTC CAAGTTAGAG TTTGCTGTCT ATCCAGCTCC CCAAGTGTCC ACCTCTGTAG
TTGAACCATA CAACACCGTT TTGACAACCC ATACCACCTT GGAACACGCC GATTGTACGT
TTATGGTTGA CAACGAAGCC ATTTACGACA TGTGCAGACG TAATTTGGAC ATTTCCAGAC
CCAACTTTGA CTCATTAAAC AGCTTGATTG CCCAAGTTGT TTCTTCTGTC ACCGCCTCCT
TGAGATTTGA CGGTTCCTTA AACGTGGACT TGAACGAGTT CCAGACTAAC TTGGTTCCAT
ACCCTAGAAT CCATTTCCCA TTGGTTTCGT ACGCTCCTGT TTTCTCCAAG CAAAGAGCTA
ACCACGAATC CAACTCTGTA GCTGAGATCA CTGCTTCTTG TTTCGAGCCA GGTAACCAGA
TGGTTAAGTG TGATCCTAGA ACCGGAAAGT ACATGGCTAC TTGTTTGTTG TACCGTGGAG
ATGTAGTCAC CAGAGACGTT CAAAACGCCG TAGCTCAAGC CAAGGCCAAG AAGACTGTTC
AATTGGTTGA CTGGTGTCCT ACCGGCTTCA AGATTGGTAT TTGCTACCAG CCACCTACAG
CCATCACTGG CTCCGAATTG GCCTCTGCCA GCAGAGCTGT TTGTATGTTG TCTAACACTA
CTGCCATTGC TGAAGCCTGG AGAAGAATCG ACCGTAAGTT CGACTTGATG TACTCCAAGA
GAGCTTTCGT CCACTGGTAT GTTGGTGAAG GTATGGAAGA AGGTGAATTC ACTGAAGCCA
GAGAAGACTT GGCTGCTTTG GAAAGAGACT ACATCGAAGT TGGAACCGAC TCGTTCCCAG
AAGAAGAAGA AGAATACTAA GCTAGCTTGG GTTTTACTGG TTCTTCTTTT CTTTCAATTT
AAAGGTCAGC GATGGTTGCT CTACACTTTA TAGTTCATTC TAATACCCTG CTTTGTTCAT
ACTTTCTTTG GTTTTCCTCT GTGGTTTTTT TAGTATATAA TATACATTGT TACGTATAAG
CTTTGTGAAG CTACGTGTGA AGCTATGTAT AATTCTATTG TGATTCATAT ATAATATATA
GATTTAATAA TTATAGT
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| Protein sequence | MREVISINVG QAGCQIGNAC WELYSQEHGI RPDGYLQEGL DRPKGGEEGF STFFSETGSG
KYVPRALYVD LEPNVIDEVR TGKYKDLFHP EQLIAGKEDA ANNYARGHYT VGREILDDVL
ERVRKMADQC DGLQGFLFTH SLGGGTGSGL GSLLLEQLSI DYGKKSKLEF AVYPAPQVST
SVVEPYNTVL TTHTTLEHAD CTFMVDNEAI YDMCRRNLDI SRPNFDSLNS LIAQVVSSVT
ASLRFDGSLN VDLNEFQTNL VPYPRIHFPL VSYAPVFSKQ RANHESNSVA EITASCFEPG
NQMVKCDPRT GKYMATCLLY RGDVVTRDVQ NAVAQAKAKK TVQLVDWCPT GFKIGICYQP
PTAITGSELA SASRAVCMLS NTTAIAEAWR RIDRKFDLMY SKRAFVHWYV GEGMEEGEFT
EAREDLAALE RDYIEVGTDS FPEEEEEY
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