| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83594 |
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| Symbol | ERF2 |
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| ID | 4838609 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1264331 |
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| End bp | 1267848 |
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| Gene Length | 3518 bp |
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| Protein Length | 707 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389924 |
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| Product | elongation release factor |
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| Protein accession | XP_001384539 |
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| Protein GI | 150865356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
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| TIGRFAM ID | [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.432493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.18618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA ACTACGACCA GGACAAGTTG GCCCAGGACC TCCAGAACTC CTCCATTGGC
GGAAACGACC AGCAGCAACT GAACCAGTAC AAGCCTGGTA ATGCCCAGGC TTTTGTTCCA
CAAGGGGGCT ACCAACAGTT CGACCAGTAT CAACAGCAAC AGAACTACTA CAACCAACAG
CAGAACTACA ACCAAGGTGG TTACCAGCAG TACCAGCAGC AGCCCCAGCA GTATCAAAAC
TACAACAATA ACAACCGCGG AGGATACAAC CAGCGCGGAG GATACCAGAA TACTCGTGGC
GGCTACAACA ACTATAACAA TCGTGGGGGA TACCAGAACT ACAACAACTA TAACAACAGT
AGAGGAGGGT ACCAAGGCTA CAACGCCAAC AACTATAACA ATAACAGAGG CTATAACCAG
TACGACAATG TCGATGTTGA CGCTTCTGGT GCTCCTGCAG CCCAGGGGAT GTCTTTGGCA
GATTTCCAGA AACAGAAGGA TGCCCAAGCA TCTTCATTGA ACAAGCCAGC TGTTAAGAAG
ACGCTCAAGT TAGCTCCTTC TAGCGGAATC AAATTGGGCA ATGCCACCAT CAAGGTTGGA
GCCAAGAAGG ATGATGTTTC TAAGGAATCC TCACCAGCCC CAACTTCTTC TGCTACCACT
GCTTCATCTG CTTCTAAGGA ATCGACTCCA GTAGCTGAAA CCAAGGAAGA AGTAACTACT
AACAAGACTG AAACCAAAAA GACCGAGGAA GTCAAGAAGA CCGAAGTAGT CAAAAAGGAA
TCTACTCCTG TAGCTTCTAC TGGTTCTGTA TCTGCCAGGG AATCGACTCC TATCTCCACT
GCTTCTTCTG TAGCTAAGGA ACAGGAAGAT GATGTTGACG AAGAAGTCGT TAAGGACTTG
TTTGGTGGTA AGGACCATGT TTCCATCATC TTCATGGGCC ACGTTGATGC TGGTAAGTCT
ACAATGGGAG GTAATATCTT GTACTTGACT GGTTCTGTCG ACAAGAGAAC TGTGGAAAAG
TACGAAAGAG AGGCCAAAGA TGCCGGTAGA CAGGGTTGGT ACTTGTCGTG GGTGATGGAT
ACCAACAAGG AAGAAAGAAA CGACGGTAAG ACCATTGAAG TTGGTAAAGC CTACTTCGAA
ACAGAAAAGA GAAGATACAC CATCTTGGAT GCACCAGGGC ACAAGATGTA TGTTTCCGAG
ATGATTGGTG GTGCTTCTCA AGCCGATGTA GGAATCTTGG TGATTTCTGC CAGAAAGGGT
GAATATGAAA CTGGTTTTGA GAAGGGTGGT CAAACCAGAG AACACGCTCT TTTGGCTAAG
ACTCAAGGTG TAAACAAGAT CATTGTCGTT GTAAACAAGA TGGATGATCC TACTGTAGGC
TGGGCTGAAG AACGTTACAA CGAATGTATC ACCAAGTTGG GTGTGTTCTT AAAGGGTATT
GGTTATGCCA AAGAAGACAT CGTGTTCATG CCTGTTTCCG GATACACTGG TGCAGGTTTG
AAAGACAGAG TTAACCCCAA GGATTGTCCT TGGTACACTG GACCAGCTTT GTTGGAGTAC
TTAGACAACA TGGAGACTGT CAACAGAAAG ATCAACGGTC CTTTCATGTT GCCAATTTCT
GGAAAGATGA AGGACATGGG TACAGTAGTA GAAGGTAAGA TTGAGTCTGG TCATATAAAG
AAGGGTGGCT CCTTATTGTT GATGCCTAAT AAGGTCAATG TAGAAGTCTT GACAGTCTAC
AACGAAACAG AACAAGAGTG TGAAACAGCC TACAGTGGAG AACAGGTAAG ATTGAGATTG
AGAGGTGTCG AAGAAGAAGA CTTGCAACCA GGTTATGTAT TGACCTCACC CAAGAACCCA
GTCAAGACTG TTACCAGGTT TGAGGCTCAG ATCGCCATTG TCGAGTTGAA GTCTATCTTA
TCTAACGGTT TCTCGTGTGT AATGCATTTG CATGCTGCCA TTGAAGAAGT TAAGTTCATT
CAGTTGAAGC ACAAGTTGGA AAAGGGAACC AACAGAAAGT CCAAGAAGCC TCCAGCATTT
GCCAAGAAGG GAATGAAGAT CATTGCCGTG TTGGAAGTTG CTGAACCAGT CTGTGCCGAG
ACTTATAATG ATTACCAACA ATTAGGTAGA TTCACCTTGA GAGATCAGGG TACTACCATT
GCCATCGGTA AGATCACCAA GTTGTTGTAG AAAGCTTCTA CGTGTACATA AGTGCATATT
ATATACGATT GTAAGACTTT TTATAAGTAT TAAATGCATT CCTATTGTCA TCTATTAGTA
GTTACTATTC TTTTTTATAC TATGGTACAA TGATTTCCCC TAGCACTAAA ATTCATTGCT
GGTTTCCTCA TCTATTAATG ATTCGAATAT TTCAATAAGA TTCTCTAAAC CCTCAAGAAT
GTTCTCGTCG TGACCCTGGC CATGAACAAA CTTGGCATGG GCAAAGTCTA TCATCTTCAA
CGTACTTAAT GGTGCTAGAA GCTCTCTTTC TCTTCCTTCA TCTTCGCTAT CCTCTTCATC
TGAATCTTCA CCAAGAAGAG GTTCAAAAAT GAGTGGATCG GCCTGATAAT ACGAGTCGTC
GTCAAGAACC TTACCATCTC TGTCTAGCCA CCTAGTCAAA TCGTTTTCGT ATATAAACAA
GAGAGAACCT GAAAACACCC TGATTTCATA GTCTAGCAAA CAATTATAAA GCAATTGCAA
TCGCTTAAGA GTAGATTCCA AAAGTCTCTG GAGAATCTTT TTACCGTGTG GCTCAATGGT
ATGGAGGTGG TGGTTGAAAA ATAGAAGTAG CCCTTGTTTT ATGTTCCTCT TGTCAAGCGA
TCTGCCGAAG AACTTGTTGA ACTCAAGATA ATTGGAATTA TCGCTATCAT GAGAGATGAC
ATTTACTGAA GTCAGGTTCA TATTGGGATA CAATTCTGTA GTTGGTTTCT TTTCTGAATT
TCCACAATAA ACCTTCATTC CACATATTCT GAAGCTTAGA GAGCCTGTTG TTGTTGATTC
GCTGACTTTC TGTAGTCTGG CAATCTTTTC TGGTGCTGTG ACAGAATCGT CCGTAAGTTT
CGATCCAAGC TTGATATCCA AGATACTTGG ATAGGTGAAG CCATGGTATA AATTCTGAAG
CACAATGTAC TCTTTGTCTG TATCATTTGT AGTGAGTTCA CTAACTGATT TTTGAATCAC
TAGTGGATCC AGAGGGTTTA AGAAGCCTCC CTTGACATTT TCGCTAGTGG TTTCGGCATG
TCCTTGTATG ATCGCATTCT GATTGCTTTC ATGAAGCTTC CCCATATATA CGGGGAGCCA
ATCAACAAGT TTAGAACCTA CTGGCTTTTC TTCTAAATCG GCGCCGTCAG CAGCATCGTT
ATTGTAGGTA TCGGAGTAGA AGTCTAATTC TTGTTGAGAA GTGGGTTTCA CAAAGAGAGA
GCCCTCCTGA AGAGTCATTG AACCAGCATG GCCTGCTGCT TGGTGTAATG ATGGAGTGAG
TCCAGAACTG TAAGGAGGAC TAGAATGATT TACGCTAG
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| Protein sequence | MSENYDQDKL AQDLQNSSIG GNDQQQSNQY KPGNAQAFVP QGGYQQFDQY QQQQNYYNQQ
QNYNQGYNQR GGYQNTRGGY NNYNNRGGYQ NYNNYNNSRG GYQGYNANNY NNNRGYNQYD
NVDVDASGAP AAQGMSLADF QKQKDAQASS LNKPAVKKTL KLAPSSGIKL GNATIKVGAK
KDDVSKESSP APTSSATTAS SASKESTPVA ETKEEVTTNK TETKKTEEVK KTEVVKKEST
PVASTGSVSA RESTPISTAS SVAKEQEDDV DEEVVKDLFG GKDHVSIIFM GHVDAGKSTM
GGNILYLTGS VDKRTVEKYE REAKDAGRQG WYLSWVMDTN KEERNDGKTI EVGKAYFETE
KRRYTILDAP GHKMYVSEMI GGASQADVGI LVISARKGEY ETGFEKGGQT REHALLAKTQ
GVNKIIVVVN KMDDPTVGWA EERYNECITK LGVFLKGIGY AKEDIVFMPV SGYTGAGLKD
RVNPKDCPWY TGPALLEYLD NMETVNRKIN GPFMLPISGK MKDMGTVVEG KIESGHIKKG
GSLLLMPNKV NVEVLTVYNE TEQECETAYS GEQVRLRLRG VEEEDLQPGY VLTSPKNPVK
TVTRFEAQIA IVELKSILSN GFSCVMHLHA AIEEVKFIQL KHKLEKGTNR KSKKPPAFAK
KGMKIIAVLE VAEPVCAETY NDYQQLGRFT LRDQGTTIAI GKITKLL
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