| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83421 |
|---|
| Symbol | |
|---|
| ID | 4838368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 67035 |
|---|
| End bp | 68252 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640389683 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384312 |
|---|
| Protein GI | 150865195 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAC GCTTCCACAT AGCCTTCTAC ATTGCCATAG TTGTTCTTCT GATGCTCTTG
TCGTTTGTCA CCAAAAGGTC GGTCGCTGCC TCGGCCAGAC CAGCTTCAGC TGCTCCAAGA
TTCGCATCCA GGAGATCGTT TTCGTTTGGA TCCTCTTCAT GGTCTTCAGC TAAGACTCCT
GGTTCTTCCA AGTCGTTTTC ATCGTCTACA TCATCTTCAG CCTCAGCTTC TGCTGCTTCT
GCTTCCTCCA ACTACGACAA TGCACTTTCC TCAGTGCTAC ATTACGATAT CGCGGTAGCC
TACCAGCCTA AGGATAGAGA GGAGTCCAAC TTGTTCAAGA AGAAACACAA CAAGCCCAGT
CCTGCGCTCG AATCGCCGCT GGGAGAAGAC AATCTTTTTG TGTCTCTGCA ATCTGCTCAG
GGTTACGTAG CCATAGGTGT AGCTGATGGT GTTGGCGGTT GGTCTGAAGC AGGCTATGAT
TCGCTGGCTA TCTCCAGAGA GCTCTGTGCA TCGATGAGAA ACAAATTCGA GAATGCAGAA
AACGTGCAAA CATTGACTCC CAAAGAACTC TTGTCTAAGG CATTTGACGA GATCTCTACT
TCGCCAAAAG TTGAAATCGG AGGTACAACT GCATGTTTGG GAATTTTGAC TCCAGATAAG
AAGCTCCTTG TGGCTAACTT GGGAGATTCA TGGTGTGGCT TGTTTAGAGA CTACCAGCTT
GTGCGTGAGT CTCATTTCCA GACCCACAAC TTCAACACGC CCTACCAGTT GGCTAAGATA
CCCGCACAGA TCATGCGCCA AGCCCAGCTT GAGGGTCGCC GTTACATTGT AGATTCTCCC
AGCTTAGCCG ATGAGTACGA ATGGGACTTG AAGAAAGACG ATATCATCAT GTTTGCCACA
GACGGGGTCA CTGACAATGT GATTCCCAAG GATATCGAAA TCTTCTTAAA GGACCAACTT
TCCGATGGAA ACAACAAATT AGACGTCGTA GCCAAAACCT TCGTCAAGGA AGTTGCCAAA
GTGTCGAAAG ATACAAATTT TCCCAGTGCG TTTGCCCAGG AGTTATCGAG GCTCACAGGT
CAAAAGTACT TGGGAGGTAA AGAAGACGAC ATCACAGTGG TGATTGTCAG AGTGACCTAG
AAGTGATCAT TTCATGTACT ATATATTTTT GTATAATAGT CTGCTCGCTA GAGTGTAGCA
TAGAAGAAAG AGAATTAC
|
|---|
| Protein sequence | MARRFHIAFY IAIVVLSMLL SFVTKRSVAA SARPASAAPR FASRRSFSFG SSSWSSAKTP
ASASAASASS NYDNALSSVL HYDIAVAYQP KDREESNLFK KKHNKPSPAL ESPSGEDNLF
VSSQSAQGYV AIGVADGVGG WSEAGYDSSA ISRELCASMR NKFENAENVQ TLTPKELLSK
AFDEISTSPK VEIGGTTACL GILTPDKKLL VANLGDSWCG LFRDYQLVRE SHFQTHNFNT
PYQLAKIPAQ IMRQAQLEGR RYIVDSPSLA DEYEWDLKKD DIIMFATDGV TDNVIPKDIE
IFLKDQLSDG NNKLDVVAKT FVKEVAKVSK DTNFPSAFAQ ELSRLTGQKY LGGKEDDITV
VIVRVT
|
|---|
| |