Gene PICST_83357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_83357 
SymbolRPL31B 
ID4838790 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1696141 
End bp1697050 
Gene Length910 bp 
Protein Length113 aa 
Translation table12 
GC content36% 
IMG OID640390105 
Product60S large subunit ribosomal protein 
Protein accessionXP_001384630 
Protein GI126136212 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2097] Ribosomal protein L31E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGCAATCA TCCAAAATGG CTTTACAAGA CGTTGTTACT CGTGAATACA CCATCAACTT 
GCACAAGAGA GTATGTAAAG AAAGCTGCGG AAAGAAAGAC GTTTAAATGG GGATTATCCG
AAGACTGAAA AATTCCAGAA TTATACTCCA AAATCCAAGC GAAGGCTCGA AGTCGATTAG
AAGAACGTAA TATCACCAAA CTGAAAACAT TATCAAAAGT CAATATTCAA TATGAAGAAT
TAACGTGACA GAGAAGAAGA ATAAAGAGGT CAGAACATTT AAGTTATTCA TTCGTCTATG
TCCATTCTAT GCTGTAATGT GGAAATAGCA AAGTTTTAGA AACTCCAGCA GTAGTGTTCC
ATGGAAGCTC AGAACAGCAT GTTATTATCA GACTTGTCAT CCCATACATA GATGTCGTAA
GCATCTTCCA TTTGAAAATT TAGCCCAGAG AAGTATTCCA ATAATTTCAA GCATATTATC
AAATAGAAAA AGTCATTCTG ATCCCCGTCT ACGTCCAGCA CATTATTTTC GAATTTTATA
CTAACCTATT TAGTTGCACG GTGTTCACTT CAAGAAGAGA GCTCCAAAGG CTGTCAAGGA
AATCAAGAAG TTCGCTACTT TGCACATGGG TACCACCGAT GTTAGATTAG ATCCAAAGTT
GAACGTCCAA TTGTGGAAGA GAGGTGTTCA AGGTGTTGAA AACAGATTGA GATTGAGAAT
CTCTAGAAAG AGAAACGACG AAGAAGACGC CAAGGAAAAG TTGTTCGCTT TCGTTGAACC
AGTCATTGTT CCAACCACCA AGGGTTTGCA AACTGTTGTT GTTGATGAAG ACGAAGCTTA
AGTTGAACTT CAAGTTAAGT AGTTTTTCAT AAATAAGAAG TTTGTATAAT AAATTCATAA
TCATTGTATT
 
Protein sequence
MALQDVVTRE YTINLHKRLH GVHFKKRAPK AVKEIKKFAT LHMGTTDVRL DPKLNVQLWK 
RGVQGVENRL RLRISRKRND EEDAKEKLFA FVEPVIVPTT KGLQTVVVDE DEA