| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77740 |
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| Symbol | |
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| ID | 4838859 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1391452 |
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| End bp | 1396034 |
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| Gene Length | 4583 bp |
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| Protein Length | 1423 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390174 |
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| Product | predicted protein |
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| Protein accession | XP_001384225 |
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| Protein GI | 150865133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.29845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.287043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTATATATAA TTCATCTGTT CCCATTCATA GCATCATTAT TAATTTGTAG CCGAAATCGT
GTCGATTTTA TCTGCTAAGA ATTTTCCACT ACCCCAGGTC TAAGTGAGAA AATAAGTCTC
CAGTTCTACT TTTGATTTTC ACAACCAGAC ACATTTTTTG AATTTTCCAG TCTCACATCA
AAAAGATACC AACATGGAAG TCAGGCTCGA GTCGGGCTCG GAGCTCGTCA GACAGAATCG
TCTCCTCAGT TTTCTTCTCT CGAAGAATGT GCCTCATCTA CCCACCGACG AAGAGAGAAA
GATATATCCA GAGGGAACTA CCAACTTCTT CTACAGATTC TTTTTCTGGT GGTTGAACCC
GGTGATGAGA ACCGGATACA AGAGAACATT GGAACCCCAG GACTTGTTCA AGTTATCGGA
CGATATCAAG ATCGAGAACA TGGCTAATAG GTTCTACCAT TACTTTGAAA GAGACCTTGA
AAGAGCCAGG ACAAAGCATG TGGAGAAAAA GTGCAAAGAA AGAGGCGAAA CTTTAGCAAC
AACAAAGGTT GACCCAGAAG AAGATTTAAA AGACTTTGAA TTGTCGAAAT TCACAACTGT
TTTCGCATTG TTCAAAACCT TCAAGTACCA GTATTCTGCA GCTTGTGTCT TCTTGTGTAT
GGCTAACAGT GCTTCTACTT GTAACCCATT ACTTCTCAAG AAGTTGATCC AGTATGTGGA
AAGAAAAGCT TTGGGTGTAG AAGAAGGTAT TGGAAGAGGG TTGGGCTACT CTTTTGGAGC
TTCGGCCATA GTTTTCCTCA TTGGTGTCCT GATTAACCAT TTCTTCTACA GATCCATGTT
GACTGGAGCC CAGGCTAAGG CCGTTTTGAC CAAGGCATTA TTAGACAAGT CTTTCAGACT
CAGCGCTGAA GCTAAACACA AGTATCCTGT AGGAAAAATC ACATCTATGA TGGGTACAGA
CTTGGCGAGA ATTGATTTTG CTATTGGATT TCAACCTTTC TTGATTATTT TCCCCATCCC
TATCATCATT GCAGTAGCCA TCTTGATCGT TAATATCGGA GTATCTGCCC TTGTAGGTGT
TGCCATTCTT GCATTCTTCT TTTGTGCCAT TGCTGTATCA ACGAGAAAGT TGTTTGCCTA
TAGATTCACA GCCAACAAGT TCACCGATGC GAGAGTGGAC TTCATCAAGG AAGCATTGAA
CAACTTGAAG ATCATCAAGT TCTACTCGTG GGAACCTCCT TACCACGAGA ATATCTCAGA
CATCAGAAGG AAGGAAATGA GAATCATCTA TAGAATGCAA GTGTTGAGAA ACATCATTAC
TGCCTTCTCA ATGTGTTTGA CATTGTTTGC TTCCATGATC TCCTTCTTGG TTTTGTATGC
TGTAGACAAG AATAGAAAGG ATCCTGCTTC TATTTTCTCG TCCATCTCCT TGTTCAACGT
GTTGACGCAG CAGGTGTTTT TGGTTCCTAT GGCTTTATCT TCGGGTGCTG ACGCCTATCT
TGGTATCGGT AGAGTTGGTG AGTACTTGTC GAGTTCAGAA ACCAACCTTG AAGAAACCAG
GATCCATGCT GATGGTGAGA AATTGATCGA AATGGACAAA GAAAATGTAG CCATCGAAAT
AGACGGTGCT CACTTTGAGT GGGACACTTT TGACGACGAT GAGGAAGAAG ATTTAGATGA
CGAAGATGAT AAGGATAAGG CTGAAGAGGG CCATGACGAG AAGCCAAAAC AAGCTCTTTC
AGCTAGCGCA AAGCATCATA CTCACAAGGA AACATTCCTC GAAAAGAAAG ACTCGACAAA
GACTTTTGTG CGTTCTGGCT CAAATTCTAC TGATAAAGAA GAAGACACAG ACTCTTCGTC
TGACGACGAA GCAGCTTTCC CCGGGTTGAC CAATATTAAC TTGACCATTA ACAAGAACGA
GTTTGTAGTT GTGACTGGTT TGATTGGTAC TGGTAAGTCC TCGTTGTTAA ACGCCATGTC
TGGGTTCATG AGACGTACTT CTGGATCTGT TAATGTAGAT GGTGAGTTAT TGTTGTGTGG
CTACCCCTGG GTTCAGAATG CCACTGTTAG AGATAACATT GTTTTTGGAT CGGAATGGGA
CGAAGAAAAA TATAATAACG TCATCTATGC CTGTTCTTTG GAAAGTGACT TGGAAATCTT
GCCTGCTGGA GATCAGACCG AAATCGGAGA AAGAGGTATC ACTTTGTCTG GAGGCCAGAA
GGCCAGAATC AACTTGGCCA GAGCTGTGTA TGCCGAAAGA GATATTATCT TGATGGACGA
TGTCTTGTCT GCTGTAGATG CAAGAGTAGG AAGACATATC ATGAACAACT GTATTCTAGG
CTTGTTGAAA GATAAGACAA GAGTGTTGGC TACACATCAA TTGTCTTTGA TTGGTTCTGC
TGACAAGGTT GTTTATTTGA ATGGTGATGG AACTATAGAT GTAGGCACCT TTGAAGAGTT
GAAGGCTAGA AACATTAGCT TTGCTAATTT GATGGCTTAC AACAGTGAAG CCAAGGAAGA
AGAGGAAGAA GAAGAAGTGG AGGAAGACGA AGAAGTGGTA GAAAACGAAA GAGAAATGAT
TCAACGTCAA CTCTCCAAGG TAACCAAGCC AGAAGACGAA GAAGCCGAAC ACAAAGACTT
CAACAAGAAT GAACATCGTG ACGGCCATTT GACAGAACAG GAAGAAAGAG CAGTCAATGG
TATCAACGCT GAAGTGTACC AACAGTACAT CAAGCTCGGT TCTGGTAAGT TTAGTCCCTG
GCTCTTTTGC CCCTTGCTTG TTTCATTGAT GATCTTGTCT ACCTTCTGTC AGTTATTCAC
CAACACCTGG TTGTCGTTCT GGACTGAGTT CAAGTTCACT AACAAATCCA ATGGTTTCTA
CATCGGCTTC TACGTCATGT TCACTGTGTT GAGTTTCATC TTGTTGACCT GTGAATTCGT
CATGCTTGTG TATTTGACCA ATACTGCTTC TGTTCGTTTG AATATCATGG CTATCGAAAA
GGTTTTGCAT GCCCCAATGG CTTTCATGGA CACCACCCCC ATGGGAAGAA TTCTCAACAG
ATTCACTAAG GATACTGATG TCTTGGATAA CGAAATCGGT GACCAGTTGA GATTCCTTGT
GTTCGTTTTT GCCAATATTA TCGGTGTCTT GATCTTGTGT GTTATCTACT TACCTTGGTT
TGCTATTGCC ATTCCTTTCT TGGGTTTCTT GTTTGTTGCT GTGGCCAACT ACTATCAGGC
GTCGGCTAGA GAAATCAAGA GATTAGAAGC TGTGCAAAGA TCATTTGTTT ACAACAACTT
CAACGAAACC TTGAGTGGTA TGAACACCAT CAAGGCTTAC AATGCTGAAT ACAGATTCTT
GGAGAAGAAT AATGAATTGA TCGACAATAT GAACGAAGCT TATTATCTTA CTATTGCTAA
TCAACGTTGG TTGGCCATTC ATATGGATAT CATTGCTACC ATTTTTGCCT TGTTGATTGC
TTTGCTCTGT GTCAACCGTG TGTTCAACAT CACTGCTGCC TCTGTAGGTT TGTTGTTGTC
GTATGTTTTC CAGATTGCGG GTCAGTTGTC TATGCTTATT AGAACCTTCA CCCAAGTTGA
AAACGAAATG AATTCAGCTG AAAGACTTGC CAGTTACGCA TTTCATTTAC CTGAAGAAGC
TCCTTATCTC ATCAATGAAA GAACCCCAGC TCCAAGCTGG CCAGACAAGG GTATTGTCAA
GTTTGATAAT GCTTCGTTAG CGTACAGACC TGGTTTACCA TTGGTGTTGA AGAATCTTTC
CTTTGAAGTA AAGCCTTCGG AAAAGATTGG TATTTGTGGT AGAACTGGTG CTGGTAAGTC
ATCTATCATG ACTGCTTTGT ACAGGTTATC AGAATTGGAA TCTGGTAAGA TCACCATTGA
TGACGTTGAC ATTGCAAGTC TTGGGTTGAA GGATTTGAGA TCTAAGTTGT CAATTATCCC
CCAGGATCCA GTGTTGTTCA GAGGCTCTAT CAGGAAGAAC TTGGATCCTT TCAATGAAAG
CTCGGATAGT AAGTTGTGGG ATGCCTTGGT GAGAACTGGT TTGATTGATC CTTCTAGATT
AGATATAGTC AAGAAGCAAG TTAAGACACA GTCTACTGAA GATGAAGAAG GGTCTATTAT
CCACAAGTTC CACTTGGATC AGCAGGTTGA AGATGAAGGT TCCAACTTCT CTTTGGGTGA
AAGACAATTG ATTGCCTTTG CCAGAGCTTT GGTGAGAGAC TCCAAGATTT TGATTTTGGA
TGAAGCCACT TCGTCCGTCG ATTACGAGAC GGATTTCAAG ATTCAAACCT CTATCATCAA
GGAATTCTCG CAATGTACCA TCTTGTGTAT TGCGCACAGA TTGAAGACGA TTATTAATTA
CGATAGAATC TTGGTGTTGG ACAAGGGAGA AATCAAGGAG TTTGACACTC CATGGAACTT
GTTCAACATT AGCAATGGTA TTTTCCAGCA AATGTGCCAG AAGTCTAATA TTACGGAGGA
AGACTTCGCC AACCTCAAAA ATTTCTAGTA CAACAGCGTT TGTACGCTCA TAGCCTAATA
AAATAATATA TAAAGAAGTA TTA
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| Protein sequence | MEVRLESGSE LVRQNRLLSF LLSKNVPHLP TDEERKIYPE GTTNFFYRFF FWWLNPVMRT
GYKRTLEPQD LFKLSDDIKI ENMANRFYHY FERDLERART KHVEKKCKER GETLATTKVD
PEEDLKDFEL SKFTTVFALF KTFKYQYSAA CVFLCMANSA STCNPLLLKK LIQYVERKAL
GVEEGIGRGL GYSFGASAIV FLIGVSINHF FYRSMLTGAQ AKAVLTKALL DKSFRLSAEA
KHKYPVGKIT SMMGTDLARI DFAIGFQPFL IIFPIPIIIA VAILIVNIGV SALVGVAILA
FFFCAIAVST RKLFAYRFTA NKFTDARVDF IKEALNNLKI IKFYSWEPPY HENISDIRRK
EMRIIYRMQV LRNIITAFSM CLTLFASMIS FLVLYAVDKN RKDPASIFSS ISLFNVLTQQ
VFLVPMALSS GADAYLGIGR VGEYLSSSET NLEETRIHAD GEKLIEMDKE NVAIEIDGAH
FEWDTFDDDE EEDLDDEDDK DKAEEGHDEK PKQALSASAK HHTHKETFLE KKDSTKTFVP
FPGLTNINLT INKNEFVVVT GLIGTGKSSL LNAMSGFMRR TSGSVNVDGE LLLCGYPWVQ
NATVRDNIVF GSEWDEEKYN NVIYACSLES DLEILPAGDQ TEIGERGITL SGGQKARINL
ARAVYAERDI ILMDDVLSAV DARVGRHIMN NCILGLLKDK TRVLATHQLS LIGSADKVVY
LNGDGTIDVG TFEELKARNI SFANLMAYNS EAKEEEEEEE VEEDEEVVEN EREMIQRQLS
KVTKPEDEEA EHKDFNKNEH RDGHLTEQEE RAVNGINAEV YQQYIKLGSG KFSPWLFCPL
LVSLMILSTF CQLFTNTWLS FWTEFKFTNK SNGFYIGFYV MFTVLSFILL TCEFVMLVYL
TNTASVRLNI MAIEKVLHAP MAFMDTTPMG RILNRFTKDT DVLDNEIGDQ LRFLVFVFAN
IIGVLILCVI YLPWFAIAIP FLGFLFVAVA NYYQASAREI KRLEAVQRSF VYNNFNETLS
GMNTIKAYNA EYRFLEKNNE LIDNMNEAYY LTIANQRWLA IHMDIIATIF ALLIALLCVN
RVFNITAASV GLLLSYVFQI AGQLSMLIRT FTQVENEMNS AERLASYAFH LPEEAPYLIN
ERTPAPSWPD KGIVKFDNAS LAYRPGLPLV LKNLSFEVKP SEKIGICGRT GAGKSSIMTA
LYRLSELESG KITIDDVDIA SLGLKDLRSK LSIIPQDPVL FRGSIRKNLD PFNESSDSKL
WDALVRTGLI DPSRLDIVKK QVKTQSTEDE EGSIIHKFHL DQQVEDEGSN FSLGERQLIA
FARALVRDSK ILILDEATSS VDYETDFKIQ TSIIKEFSQC TILCIAHRLK TIINYDRILV
LDKGEIKEFD TPWNLFNISN GIFQQMCQKS NITEEDFANL KNF
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