| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67671 |
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| Symbol | |
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| ID | 4838874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1484528 |
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| End bp | 1486015 |
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| Gene Length | 1488 bp |
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| Protein Length | 341 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390189 |
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| Product | predicted protein |
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| Protein accession | XP_001384240 |
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| Protein GI | 150865141 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0129637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCAAATTCC CAGATTCAGA CTAATTAGCC AAACCTGTAT ACCTCAAGCC TTCGTTCCCC
TCCAGCCATC ACCAAATACA AGTCATCTCT GGTTTAACCC TCAAAAGGAA GCCTGGTCGT
CCTCGTGGAA CCTCACTGTG TCAGTCCAGT CCCACTAGCT TTATCCTCGG TTTAACTGAA
CCCCGGTCAA GCTTCGCTTC GTTTCCGTGC ACTTCGCTTC GGTTATCGTA GCCAAAAAAT
CTGAAAAATC CCACATCGTC AGGTGTGAGT TGAGCCTCAC CGGTGCTTCA ATAGAGTGTC
GCTGAGACTT ACGCTGCCTG TAAGATATAC GAATACCTAC TATCTACTGT CTATATTATC
CCTAGTTACC TTATCTTAGT CTTTCTTTGC TACCGTTTGC TATCTGAAAA ATTGAAAGAT
TGAAACTGAA ATTCCGGAAA TTTTTCATAC CTCATCGCCG ATATGTCTTC TATATCCACC
GATTCGTTGC CGTACTTCGA TCCGGCTGTC GATAGGAGAG TGGCTCTCAT CACCGGAGGC
AATTCCGGAA TCGGCTACTA CACGGTGCTC CAGCTTTATC TCCATGGCTA TGTAGTGTAC
ATCGCCGGTA GATCTCGCTC GAGAGTGTTG AAGTCCATCA AGGAATTGAA GGAAAAAGCC
AACACCATTA CAAAAGATTA CGAAATCCAA AACGCAAATA CGAATTTGAC TTCTCCAAAG
CGTTGTCTCG GTGAATTGGT CTATTTGGAA ATCGATCTTT CCAGCTTATC ATCTGTTATT
GCTGCCGTCG ATACCTTCTC CAACATGGAA CTGAAGTTGA ATCTTCTCAT AAACAACGCT
GGAGCCATGG CTGTTCCATA TGCTCTAACC AGAGACAATT TTGAGATTCA GCTCCAAACC
AACTTCGTGT CGCCGTTTCT TCTCACTACT AAGTTGCTAC CTTTACTAGA GAGAACCGCG
GACTTGTACC CCAGCACAGA ACCTCCTCGC GTAGTTTATC TAAGTAGCAT TGGCCACAAG
TTTGCTATTC GTTTCTTCTC GTTAAACACT TCCTTCAACT ACAGGCCGAA CCTATTGTTC
ACCTGGCTTC GTTACGGAAT GGCCAAAACA GCAGGCATCC ACTTTATGAA GATGCTAGCT
TTGCGTAATC CTAAGATCCT CTGTATGCTG GTGCATCCGG GCTTTGTGAT GAATACAAAC
TTGTTCACTT ACTGGACCCG TTTGCCCATC ATCGGGATCC TCTTCTGGTG CTTCTTCCAG
ATTTTTGGCT ACTTTCTCGG CGTATCCAAC GATGAAGGAT CGGATGCGAT CATTAAATGC
TGTCTCGAAC CAAAACTCTC CTTGGAAAAT GATAATGGGA AGTACTTTGT TACTGGAGGC
ATCGAGGCAG AGCCTTCCAA GGTTGCCAGC AACATGGACT ACGCAGCAAG AACATGGATA
TGGACCGTTC ATGAACTCAG CGAGAGGGGA ATCACAATTC CAAACTAA
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| Protein sequence | MSSISTDSLP YFDPAVDRRV ALITGGNSGI GYYTVLQLYL HGYVVYIAGR SRSRVLKSIK
ELKEKANTIT KDYEIQNANT NLTSPKRCLG ELVYLEIDLS SLSSVIAAVD TFSNMESKLN
LLINNAGAMA VPYALTRDNF EIQLQTNFVS PFLLTTKLLP LLERTADLYP STEPPRVVYL
SSIGHKFAIR FFSLNTSFNY RPNLLFTWLR YGMAKTAGIH FMKMLALRNP KILCMSVHPG
FVMNTNLFTY WTRLPIIGIL FWCFFQIFGY FLGVSNDEGS DAIIKCCLEP KLSLENDNGK
YFVTGGIEAE PSKVASNMDY AARTWIWTVH ELSERGITIP N
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