Gene PICST_58974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_58974 
Symbol 
ID4838676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp815034 
End bp815924 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content40% 
IMG OID640389991 
Productpredicted protein 
Protein accessionXP_001384112 
Protein GI150865059 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.722044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTC TAGGCAAAAA TGTCGCTGAA TGGGGTATAG CGATCAAACA GAAACAATGG 
TTCATTCCAG ACACCTTGTC AGTGGGATTG TCCAATCACT TGATAGATCT CTTGAATAAA
GTGCTACCCG AAAACCTATA CCAACCTAGA CTCGAAATAG ACGATGGCAT GTTAGGTGTC
ATGTATGGGA ATGGATTCCA TTTTCTCTAC AATAACCAGG CAAATAACAA CTTGGGTTCG
GACGGGTATG ACAATTATCA GGCTCCAACT TCTCAAGGTA ATCAATTGTA TTCTAGACGG
TTGTGGGTTA AAGGCTCAAT CAATTTTGGT GCGAATATAG TAAGAGCATC GGATCAGCTC
AATTGTATAG AAAAAATCGA CTCCGTTCGA AGATTGGGAT TGTCAACGTT TGTTAATATC
AATAGAGATG TGACTACGTC CACAAACGCC TCTGTGTTGA AGGAAGCAAG GACATTACTC
TACACCAATG AACCTTACGA ATTTAAACCC ATGCGACATA GCTTCCCAAA TTTCACGTTC
ACCCAAGAAG TGAAACTCAC TTCTTCTGAT TTGCTCAAGT ATAGTATGTT GACTTATAAC
ATGCACAAAA TCCACATTGA CAAGGAGCAT TGTGAAACAG TAGAAAATCT TCCCAATGTC
ATTGTCCATG GGCCATTCAT GGTTACATTG CTTTTGTACT GGTTTCGGAA GCTTTATCCT
GAGGCTTCTA TAGAGCTGAT AAATTACAAG AATTTAGAAC CCTGTTTTGT GGACGAACTG
TTCACCTTGG CTAGTGTACA GAAAAGTGAA TATGAACACA ATGTGTCCAT TGTCAATGTC
CAATTGGGCA AGAAGTACTT CGACGGAGTA ATAAAATTCA GGCAGATGTG A
 
Protein sequence
MEILGKNVAE WGIAIKQKQW FIPDTLSVGL SNHLIDLLNK VLPENLYQPR LEIDDGMLGV 
MYGNGFHFLY NNQANNNLGS DGYDNYQAPT SQGNQLYSRR LWVKGSINFG ANIVRASDQL
NCIEKIDSVR RLGLSTFVNI NRDVTTSTNA SVLKEARTLL YTNEPYEFKP MRHSFPNFTF
TQEVKLTSSD LLKYSMLTYN MHKIHIDKEH CETVENLPNV IVHGPFMVTL LLYWFRKLYP
EASIESINYK NLEPCFVDES FTLASVQKSE YEHNVSIVNV QLGKKYFDGV IKFRQM