| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58577 |
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| Symbol | |
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| ID | 4838744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 691472 |
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| End bp | 692548 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390059 |
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| Product | predicted protein |
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| Protein accession | XP_001384428 |
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| Protein GI | 150865279 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5325] t-SNARE complex subunit, syntaxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0646976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.944639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGAG ACCGTACCAA TCTCTTTCTC TCATATAGGC GGACGATTCC GCGGGCCATC
CGGACAACCA ATGAGTCACG TTTTGATTCT CTCATAGAAG AAGAGGAAGG CTTGATAAAC
CAACAGAGTA GAAGGAAAAC CAACAAGTAC CGTGATACTG ATGATGGAAT TGAAATGAAA
CCGGTGATTC CTTCCCTTTT TGACATCGCC CAAGAGTTGG ACTCCCATTT AGTCACGATT
AAACGAGAGA CCAATGAGTT GCTGGCTCTC TACAAGAGAC TTATCATAGT GAATAAATCT
GACAAGAAGT CATTAGAGTC TCGAATTGAA AACTTGAACT ACGACATCTT GAAAACATTT
GAAAAGTGCT ATATACTCGT GAAAAAATTT GAGTATTTGA ATGTGAATCA TGACCGTTTA
GGCTTGAATT ACACAGAAAA CGACTTGGAA ATCTTGAACA ACTTTAAGAA AACATATGCT
ACGAAGATTC AAGACAGTTC GCTCATTTTC CGGAACCTTC AGAATAACTA CATCAAGTTC
TTGCGAGACG ATGAAGATGA AATGGATTCG CTCATTACTT CTAGAACGAG TATGGACACA
AACACATTAC TAGATGAAGA AATCGACAGA TCTCAACAAA TCGAAAACTA TCTGAAACAG
GTTCTTCAAC AAACACAACG AAATCTGAAT CAGAGTTATT TACATCAACG AGAACAAGAA
ATTTCGAAGT TGGCCATGGG AATTCTTGAG ATTCTGACTA TCTTCAAAGA GATGGAGAGT
CTTGTCGTAG ATCAGGGAAG TTTGTTAGAC AGAATAGATT ACAACCTACA GAACACAGTA
CATGACTTGA AACAGTCAGA CAAGGAGTTG ATTAAAGCCA AACATTACCA GAAGAGAACA
ACCAAGTGTA AAATCATCTT CTTGATGAGT CTCATCGTGT TCGTTCTTTT TATCATCGTG
TTGGTGAAGC CTCATGGAAG CACTACTGTT GTAGAGAAAC CAAAACACCC CCCACAGCAA
AGTATACCAG ATCGACCTAC CATAGATAAA CCTGTCGAAG GCAGTAATGT GATATAG
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| Protein sequence | MFRDRTNLFL SYRRTIPRAI RTTNESRFDS LIEEEEGLIN QQSRRKTNKY RDTDDGIEMK
PVIPSLFDIA QELDSHLVTI KRETNELSAL YKRLIIVNKS DKKSLESRIE NLNYDILKTF
EKCYILVKKF EYLNVNHDRL GLNYTENDLE ILNNFKKTYA TKIQDSSLIF RNLQNNYIKF
LRDDEDEMDS LITSRTSMDT NTLLDEEIDR SQQIENYSKQ VLQQTQRNSN QSYLHQREQE
ISKLAMGILE ISTIFKEMES LVVDQGSLLD RIDYNLQNTV HDLKQSDKEL IKAKHYQKRT
TKCKIIFLMS LIVFVLFIIV LVKPHGSTTV VEKPKHPPQQ SIPDRPTIDK PVEGSNVI
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