| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58279 |
|---|
| Symbol | |
|---|
| ID | 4838858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 1385552 |
|---|
| End bp | 1386808 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640390173 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384564 |
|---|
| Protein GI | 150865376 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.518781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC TGGAAGTAGA GCAAATAGAT AAGAAGTATA ACGTGCGGCC ATTCATAGAA
GCTCCGCTTT CGAAGTCTGA TATAGAGCCA GTCCAGTTGG ATGCTCTTGA TTTGTCTCTC
TACAAGGATG GATCAGAACA TTTTGAAACC AGGAAGAAGT TGGCAGACCA ATTGGAAAAG
TCAATTTCCA CTTCTGGATT CTTTTCTGTT GTAAATCATG GCATAGATGT AGAGAGATTC
GAGAGTTTGA AGGCTATCGC CCAATCACTT TTGGAAATCC CTGCTGAAGA GCAAGGTCCA
TATTTGGCTG GAGCATGGAA ATCTGATCTT GAAGACAGAA CTAAGTCTGT TGGCGCTGAA
AGAGGTGCTG GTTTTAAACC CAAAGGCTAC TGGTCCATGA GAAACGGTGT TCATGATTCA
ATTGTTCATT ACAACTTGAA CAATATGTTA CATCCATCGT TCTTCGACGA TTCCAAGAAC
AACCACCATC CCTTAGTCAA AGCACATTTG GAAGAAATAG CTGGATACTT CAGGTATTTG
CATAACGATG TCTTGAAAAA GATCACCTAC TTGTGTGATA TCATTTTAGA GATCCCTGAA
GGAACAATCT GGAAATTGTA CTACAGTGTT GAAGAAAATG ACTTCGAAAG ATCTGGTCAA
GGTGCTGGCA GGTTCATGTT GTACCACAAT ATGAAAGCAG AAGACGAGGC TAAGGTAGGG
AAAAACTGGC TCAGGGGTCA TTCTGATTCT GGCGGATTCA CATTCATCAC TTCTCAACCA
ATTTTATCTT TACAAGTTCG AGATTACTTC ACTGGAGAAT GGAGATATGT TGGCCACACT
CCTAATGCCT TTATTGTCAA TATTGCTGAT GCCATGGAGT TCATCACTGG GGGATACTTC
AAGTCATCGA TTCACAGAGT TGTCTCACCT CCGGAAGATC AAAAGAACTA CAGAAGATTG
GTATTGATAT ACTTCTCAAG TCCAAAAAAC ATCTCCATTG TAGACCCTGA AGCATTGGAC
TCTCCTAAAT TGGCAAGGTT GGGATTCCTG AAACCAGATG AATGGGCAAA GATCACGTTC
AAAGATTGGT ATAGTATTAA GGGACTGTTG TTTGGCAGAA AAGCAGTCAA TGATTCCAAT
AGTGATGAAC CAAACTTGGT TTTGTTGTAC GGAAGACTAC ATGAGAGGTG GCATCAAGCT
GAAGCCAACT TCACTCTCGA AGAGGCAAGA AAGAGATTCA AAGTAATTGA AATCTGA
|
|---|
| Protein sequence | MTQSEVEQID KKYNVRPFIE APLSKSDIEP VQLDALDLSL YKDGSEHFET RKKLADQLEK
SISTSGFFSV VNHGIDVERF ESLKAIAQSL LEIPAEEQGP YLAGAWKSDL EDRTKSVGAE
RGAGFKPKGY WSMRNGVHDS IVHYNLNNML HPSFFDDSKN NHHPLVKAHL EEIAGYFRYL
HNDVLKKITY LCDIILEIPE GTIWKLYYSV EENDFERSGQ GAGRFMLYHN MKAEDEAKVG
KNWLRGHSDS GGFTFITSQP ILSLQVRDYF TGEWRYVGHT PNAFIVNIAD AMEFITGGYF
KSSIHRVVSP PEDQKNYRRL VLIYFSSPKN ISIVDPEALD SPKLARLGFS KPDEWAKITF
KDWYSIKGSL FGRKAVNDSN SDEPNLVLLY GRLHERWHQA EANFTLEEAR KRFKVIEI
|
|---|
| |