| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58212 |
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| Symbol | YMT1 |
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| ID | 4838365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 57443 |
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| End bp | 58531 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389680 |
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| Product | D-threo-aldose 1-dehydrogenase |
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| Protein accession | XP_001384309 |
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| Protein GI | 150865192 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGAAT TTTTAGAGCC ACAGACAAAT GAGTCGCAAG CTATCGGAGA CTCCATTGTT
GTCCAACCCT ATTCCATAGC TAACTTGCCA CCTTTGGTTG TAGGAGGTGC TGTTTTCAAC
ACACAGTATT CGCTGAACCC CAGCAGTCTC CCTATCCAGG AGATTCTTGA AGATGCTTTT
GCCAAAGGGT TGAATGCTAT CGATACTTCG CCCTACTATG GTCCATCAGA GATCCTCTTG
GGAGAAGCTC TCAAGAAGAT TTCTTTCCCA AGACAAGAGT ACTACATATG TACCAAAGCT
GGAAGAGTTA AGCTTGACGA TTTTGACTAC TCGCGTGATA GTGTCCGTAA ATCTGTAGAG
AGATCGTTGG AGAGATTGAA CACATCGTAT CTTGATCTCG TGTATATGCA CGATATCGAG
TTTGTAAAAG AAGACGAAAT CTTTGATGCG TTGAAAGAGT TGAAATTGTT GAAAACCGAA
GGTCTCATCA AAAACTTCGG TATTTCAGGG TATCCTGTTC GTTTCTTGCA TAAGATTGCG
TCCCGGAGTG TAGGGATTCC AGAGATTGGA CCTTTGGATG CTGTTTTATC ATATTCTAAC
GGCTGTATTC AAAACACAAG ATTATTTGAA TTCTACGACC AGTTCTTTGA CGACTGTAAG
CTCAAGAAGT TGTCTAACGG ATCTATTCTC AGTATGTCTT TGTTGAGATC GGACATAACA
CATTCGTTCC ATCCAGCATC CAAGGAGCTC AAGGACAAGG TTTACGATAT TGCTCACCTC
TTGAAGAAGG AGTACAATGG CTTGGAATTG GCAGATTTGG CTACACGTTT TGCTTTGAGA
AAATGGTTGT TTGAAACTGT ACACCAGGCT GATTCAAGCA ATCTTCATTG GAATCCTTCT
ACCTCGATTG TGTTGGGAGT TTCTAATGTT GAAGAGTTAG ATGTTGCCAT CAGATGCTAC
TGGCAGGTGA AGAACAACAT TGACAATATC AACACCAAGG ATGATATTTT GTTTGAGAAG
GTCAAGAACT TATTGGGCCC AGAGCACTTT AACGAGGTTT GGCCAAGTGG TATTGATGGA
AGGCAATAG
|
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| Protein sequence | MPEFLEPQTN ESQAIGDSIV VQPYSIANLP PLVVGGAVFN TQYSSNPSSL PIQEILEDAF
AKGLNAIDTS PYYGPSEILL GEALKKISFP RQEYYICTKA GRVKLDDFDY SRDSVRKSVE
RSLERLNTSY LDLVYMHDIE FVKEDEIFDA LKELKLLKTE GLIKNFGISG YPVRFLHKIA
SRSVGIPEIG PLDAVLSYSN GCIQNTRLFE FYDQFFDDCK LKKLSNGSIL SMSLLRSDIT
HSFHPASKEL KDKVYDIAHL LKKEYNGLEL ADLATRFALR KWLFETVHQA DSSNLHWNPS
TSIVLGVSNV EELDVAIRCY WQVKNNIDNI NTKDDILFEK VKNLLGPEHF NEVWPSGIDG
RQ
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