Gene PICST_45495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_45495 
Symbol 
ID4838536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1280341 
End bp1280805 
Gene Length465 bp 
Protein Length155 aa 
Translation table12 
GC content51% 
IMG OID640389851 
Productpredicted protein 
Protein accessionXP_001384543 
Protein GI126136038 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.561334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.923833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAACAGCAAC CGGACGAAAC CACTGAGGTC ACGAGAAGTG CTCCTGAGAC CGAGGAAGAA 
CGTGCTGCCA GATTGGCCAA GCAGGAAGAA ATCGACGGCC GTTCCATCTA TGTGGGCAAT
GTGGACTACC AATCGACACC TGAACAATTG GAAGAGTTCT TCCATGTCGT GGGAGTCATT
GAGAGAGTGA CAATTTTATT TGATCGCTAC TCGGGATTGC CCAAGGGATA CGCCTACGTT
GAATTTGAAA AGACAGAGAG TGTAGAACGA GCCATCGAGG ATTTGCATGG CAAGGAATTC
AGAGGCAGAG AAATAAGAGT CAGTGCCAAG AGAACCAATT TGCCAGGGTT CAAGAAGAGA
GGTGGATTCA GAGGAGGATT CAGAGGAGCC TTCAGAGGTA GCCGTGGAAG CAGAGGTCCC
AGAGGAGGTT TTAGAGGAGC CAGAGGTACC TTCAGAGGTC GTGGC
 
Protein sequence
QQQPDETTEV TRSAPETEEE RAARLAKQEE IDGRSIYVGN VDYQSTPEQL EEFFHVVGVI 
ERVTILFDRY SGLPKGYAYV EFEKTESVER AIEDLHGKEF RGREIRVSAK RTNLPGFKKR
GGFRGGFRGA FRGSRGSRGP RGGFRGARGT FRGRG