Gene PICST_45036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_45036 
SymbolMUP1.2 
ID4838488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp985498 
End bp987063 
Gene Length1566 bp 
Protein Length522 aa 
Translation table12 
GC content42% 
IMG OID640389803 
Producthigh affinity methionine permease 
Protein accessionXP_001384144 
Protein GI126135240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.245416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.788743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAAAATGATG CTGGTGCTCC AGTCGAAACA AGAAATCCAT TAGGTTACAA CTTAGACTAT 
GTTTCTGCCT TCTATATGGT TATTCAAGGT ATCATAGGTA CTGGTATCTT CTTGACTCCT
GCAAGTGTCT TGAACTCTAT TGGTTCTGTT GGTGCCTCCT ACGTCTTGTG GGTTGCTGGT
TTCATCATTG CTCTCTTTGA AGTTTTCGTC TACATCGAAT TTGCTACATA CTTCAGAAAA
AGAAACGGTG GTGATGTAGC TTATTTGGAA CAAGCTTTCC CTAAGCCAGA CTATTTGGTT
CCAACAGCAT ACGCTGCTGT ATCTGTGATT TTGTCATTCT CGGTGTCTTC TGCTGTTGCA
TTCGGAACTT ATGTCATTGC TGCTAGTGAC TTGGAGCCAA CAACCTGGAA GCAAAGAGGA
ATTGGTGTTG CTATTCTTTC TTTCGTTGCT ATTTTGACTG CTGTTCACCC TAAGGCTTCT
CTTAAGTTGG CCAATTTGTT GGGTTTTGTG AAGATGGTCT TCATTGCTTT CGTTATCATT
ACTGGATTTG TTGTATTGGG TGGAGGCACC AGAGTCAATA ACCCACATGA CATATTCAAG
AATGCATGGG ATGGTACTAC ATCAGATGGT AACGCTATTG CTAATGCCAT CATCAAAGTT
TCCTTCTCGT ACGGTGGTAC CGCTTACGTC TTCGCACTTG TTGGTGAATC TAATCCCAAG
AAGACTAGGA ACTTGTTTAG ATTCTTCATT CCAGGAGTCG TTGTTCTTGT TTTCCTCATC
TATATTTTGC TTATTACTAC TTTCTATGCT GGTGCTGGCG GCCTCGCTTC AGTTAAGAAG
TCAGGTGTCT TGGTTGCCTC CCTTTTCTTT ACAAATGTAT TTGGTACCAG AGCTGCAACT
CAAGCTTTAG ATGTTCTTGT TGCGCTTTCC GCTTTGGGGC ACTTGTTAGC TGTCTTTGTG
GGACACTCTA GAGCTTTAAG AGAATGTGGA AGACAAGGAG TTCTTCCATA TCCTCGTCTC
TGGACTACCA CCAGACCATT TGGTACTCCT TTGTTGCCAG TCATTATCAC TTATGTCGTC
AATTTGATTG TTTTGCTTGC TCCACCAGCT GGTGATGCAT ACAACTTCGT TGTTGACATT
GGTTCCTACT CTGGTTATTT CTTCAAGATC TTGTTATTTG TTGGTCTTTT GTTCGTGAGA
AAGCAAAGAA AGGCAGCTGG TTTGAAACCA AATGGATGGT GGGTTCCATT GCCTATCATC
ATCATTAACA TTCTTTTCTA TCTTTTTGTC ATTGCCATGG CTTGGGTTCC TCCAAAGGGT
GGTTCCTTGA AGGGTTCTGA TGTTTCATTC TTCTACGCAA CATATGCTAT CACCACTATT
GGTATCTATC TTCTCTGTAT TGCGTACTAC TTTGTCTGGG CTAAGATCAT CCCCAAGATT
GGAGGATATC AGCACAGAAC AGTCTTCTAT GACTTACAAA ACGGTGAAAG GGGACATACT
GTTGTCAAGG TTAAGAATGA TGAAGTTGAG AAGTTCGATA AAGAACATGA CGCTTCTGGA
AGATTA
 
Protein sequence
QNDAGAPVET RNPLGYNLDY VSAFYMVIQG IIGTGIFLTP ASVLNSIGSV GASYVLWVAG 
FIIALFEVFV YIEFATYFRK RNGGDVAYLE QAFPKPDYLV PTAYAAVSVI LSFSVSSAVA
FGTYVIAASD LEPTTWKQRG IGVAILSFVA ILTAVHPKAS LKLANLLGFV KMVFIAFVII
TGFVVLGGGT RVNNPHDIFK NAWDGTTSDG NAIANAIIKV SFSYGGTAYV FALVGESNPK
KTRNLFRFFI PGVVVLVFLI YILLITTFYA GAGGLASVKK SGVLVASLFF TNVFGTRAAT
QALDVLVALS ALGHLLAVFV GHSRALRECG RQGVLPYPRL WTTTRPFGTP LLPVIITYVV
NLIVLLAPPA GDAYNFVVDI GSYSGYFFKI LLFVGLLFVR KQRKAAGLKP NGWWVPLPII
IINILFYLFV IAMAWVPPKG GSLKGSDVSF FYATYAITTI GIYLLCIAYY FVWAKIIPKI
GGYQHRTVFY DLQNGERGHT VVKVKNDEVE KFDKEHDASG RL