| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36016 |
|---|
| Symbol | |
|---|
| ID | 4839027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | + |
|---|
| Start bp | 1339793 |
|---|
| End bp | 1341124 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640390342 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384209 |
|---|
| Protein GI | 150865122 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.873623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00561321 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAC TAAACCCAGT TACTACTCAC AGAGAGTTTT CCGGTCTTCC TGGTGCTATT
GGAATCACCA TTGGTTTGCC ATCTCTCATT ATCTTTTTTG CATTAGTTTC CAACGAAGCC
TACTCTGTAC AAGGTATCAA CTTAGATTTC CAGGCGATCT TGAGTCAACT TCCACAAAGT
TCTCAAGAAT GGATTGACCT CGTGTTTGAC AAAACCGTCT GGGCTGCTTA CCTCGTGTGG
TTTTTTGTGT TGGTAGCTTT GGACTTTGTC TTGCCTGGAA AACATATGAA GGGTACTACC
TTGAGAGACG GAACCCAGTT GGACTACAAG ATTAACGGTT TGGCCATGTC CTCGACTCTC
ATCGCAGTTT TGCTTGCCAG ATTCTACCAA ACAGAAAACG GCTACTTGCC CGAATTGCTG
TTCATCTACG ATAACCAGAT GAAATTGACT CTAGTCACTA CAGTGTTCTC GTTCTTGCTT
GCAGTGTTTG TCTACGTCAT TTCTTTTGTT CCATTGGTCA AGCCAAATGC TCATGGAACT
AGAGAGAGAA TTTTATCCAT CAATGGAAAC ACTGGGAACC CCATCTACGA CTGGTTCATT
GGTAGAGAAT TGAATCCCAG AATTGGCTCC TGGGATATCA AGTTGTTCTG TGAATTGAGA
CCAGGCTTGC TCTTGTGGTT TCTCATCAAC TTGTCTTGTT TACATAACCA GTACCACAAG
TATGGTCAGG TGACTGATTC CGTTATCTTG ATCAACGTAC TCCAAGGATT CTACGTGTTC
GATGGAGTGT TGAACGAAGA AGGCTTATTG TCCATGATAG ACATCACTAC AGATGGCTTC
GGTTTCATGC TCTCTTTCGG CGATTTGGCA TGGTTGCCGT GGGTATACTC CTTTCAGGCT
CGTTACTTGA GTTTGCCTGA AAACACCTTA ACTTTGGGTC GTGGAAATGT AGCTATTATT
GTAGGTATTA TGGCTCTTGG ATATTACATC TTCCATTCAT CTAATAAGCA GAAGTCTGAT
TTCAGACAAG GCAAGTTGGA ACACCTCCAG TTGGAAAGCA TCCAGACCAC GACAGGCTCT
CGTTTGCTTT GCGACGGATG GTGGGGTGCT TCTCAACATA TCAACTACTT GGGTGACTGG
TTGATTGGCT GGGCCTGGTG TTTGCCTACT GGGTTTCAAA CCCCGTTGAC ATACTTTTAT
GTTGTATACT TTGGAACACT TTTGGTGCAC AGACAGACGA GAGATGAAGC CAAATGTAGG
GCTAAGTACG GCAAGCAATG GGAGGAGTAT GAAGAAAAGG TTCCTTACAA GATCATTCCC
TATGTGTATT AA
|
|---|
| Protein sequence | MSKLNPVTTH REFSGLPGAI GITIGLPSLI IFFALVSNEA YSVQGINLDF QAILSQLPQS
SQEWIDLVFD KTVWAAYLVW FFVLVALDFV LPGKHMKGTT LRDGTQLDYK INGLAMSSTL
IAVLLARFYQ TENGYLPELS FIYDNQMKLT LVTTVFSFLL AVFVYVISFV PLVKPNAHGT
RERILSINGN TGNPIYDWFI GRELNPRIGS WDIKLFCELR PGLLLWFLIN LSCLHNQYHK
YGQVTDSVIL INVLQGFYVF DGVLNEEGLL SMIDITTDGF GFMLSFGDLA WLPWVYSFQA
RYLSLPENTL TLGRGNVAII VGIMALGYYI FHSSNKQKSD FRQGKLEHLQ LESIQTTTGS
RLLCDGWWGA SQHINYLGDW LIGWAWCLPT GFQTPLTYFY VVYFGTLLVH RQTRDEAKCR
AKYGKQWEEY EEKVPYKIIP YVY
|
|---|
| |