Gene PICST_31414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31414 
SymbolGAT2.2 
ID4838564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp745035 
End bp745985 
Gene Length951 bp 
Protein Length316 aa 
Translation table12 
GC content43% 
IMG OID640389879 
ProductGATA-family of DNA binding proteins-like protein 
Protein accessionXP_001384441 
Protein GI150865290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.987813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC CGTCACAAAT GCATACGCCA AATCCTTCCA TTTCTAATCC ACCTGTACCC 
ATAGCCGTAA CTACTCCAGA ATATAATCAT AGATACACAT ACATCAGCAA ACCGGTAGTA
AAACATCAGA GAACAGAAAG TTTCCCTGCT CTGTTCAAAT TTCCCAGATC ACCAGAGGAG
TTGACCGACA AGGAATTACA GTCTAACAAA TCAAGAGCAG GAAGTTTCGC AACTTCTAAA
TCTCCTACTT CTACATTTGT AAGCCCCAAG CGAACTCATA AATCTGGGAG CATAGACTCT
ACCGAATTGA AGGAAGCATA CGATAATGCC AATAGCCCCA TGAATGATGT TATAGTGTTC
TGGAACAAGT TAGGAAACAG CAGCGATGAA AATTTTGATA TAGCCAGTGC AGTAGAACTG
TTATCCCCTG GTACTGTAGA ACAGCAGTTA CAAAATTGGC GTAAAGTACA ATCGGCACTT
ACCAAGTTTG AAGATTACAG AAGTGTTAGT GCCTCTAAAA CAGAAGCTTT GAGTAGCCCG
AAGAAACAAA AGACTAAGAA GAAGAGTCAA CGAGCTCCAG CTCCTTCTCT TCTACCAGCT
CCACAGCTAC ATAAAAAAGA TCATAAACCG AAAAAGAAGT TTGGATCTAC TGGAGAAATT
TTACCTATAA AGGTCGACTC CTCAGCCCTT GGCCGTCCAG GACATAAAGA GGCTGTTGAT
TATGGGGGAC TCAACCAGGA GCTCAGTATC CGAGCAGAAA TGAAATGCCT GCATTGTCGG
TCGAAAGAGA CACCTGAGTG GAGAAGAGGA CCCCTGGGAA GCCGAACGCT TTGCAATGCT
TGTGGACTAT TCTATTCTAA ACTTATAAGG AGGCATGGGT TGAAGTTGGC CGATAAGATT
ATAGCAGAGA GGAAAGAAGC TGGTCGAGTT CTTGATCGGA AGATAGCTTA G
 
Protein sequence
MTIPSQMHTP NPSISNPPVP IAVTTPEYNH RYTYISKPVV KHQRTESFPA SFKFPRSPEE 
LTDKELQSNK SRAGSFATSK SPTSTFVSPK RTHKSGSIDS TELKEAYDNA NSPMNDVIVF
WNKLGNSSDE NFDIASAVES LSPGTVEQQL QNWRKVQSAL TKFEDYRSVS ASKTEALSSP
KKQKTKKKSQ RAPAPSLLPA PQLHKKDHKP KKKFGSTGEI LPIKVDSSAL GRPGHKEAVD
YGGLNQELSI RAEMKCSHCR SKETPEWRRG PSGSRTLCNA CGLFYSKLIR RHGLKLADKI
IAERKEAGRV LDRKIA