Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31414 |
Symbol | GAT2.2 |
ID | 4838564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 745035 |
End bp | 745985 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389879 |
Product | GATA-family of DNA binding proteins-like protein |
Protein accession | XP_001384441 |
Protein GI | 150865290 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.987813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATCC CGTCACAAAT GCATACGCCA AATCCTTCCA TTTCTAATCC ACCTGTACCC ATAGCCGTAA CTACTCCAGA ATATAATCAT AGATACACAT ACATCAGCAA ACCGGTAGTA AAACATCAGA GAACAGAAAG TTTCCCTGCT CTGTTCAAAT TTCCCAGATC ACCAGAGGAG TTGACCGACA AGGAATTACA GTCTAACAAA TCAAGAGCAG GAAGTTTCGC AACTTCTAAA TCTCCTACTT CTACATTTGT AAGCCCCAAG CGAACTCATA AATCTGGGAG CATAGACTCT ACCGAATTGA AGGAAGCATA CGATAATGCC AATAGCCCCA TGAATGATGT TATAGTGTTC TGGAACAAGT TAGGAAACAG CAGCGATGAA AATTTTGATA TAGCCAGTGC AGTAGAACTG TTATCCCCTG GTACTGTAGA ACAGCAGTTA CAAAATTGGC GTAAAGTACA ATCGGCACTT ACCAAGTTTG AAGATTACAG AAGTGTTAGT GCCTCTAAAA CAGAAGCTTT GAGTAGCCCG AAGAAACAAA AGACTAAGAA GAAGAGTCAA CGAGCTCCAG CTCCTTCTCT TCTACCAGCT CCACAGCTAC ATAAAAAAGA TCATAAACCG AAAAAGAAGT TTGGATCTAC TGGAGAAATT TTACCTATAA AGGTCGACTC CTCAGCCCTT GGCCGTCCAG GACATAAAGA GGCTGTTGAT TATGGGGGAC TCAACCAGGA GCTCAGTATC CGAGCAGAAA TGAAATGCCT GCATTGTCGG TCGAAAGAGA CACCTGAGTG GAGAAGAGGA CCCCTGGGAA GCCGAACGCT TTGCAATGCT TGTGGACTAT TCTATTCTAA ACTTATAAGG AGGCATGGGT TGAAGTTGGC CGATAAGATT ATAGCAGAGA GGAAAGAAGC TGGTCGAGTT CTTGATCGGA AGATAGCTTA G
|
Protein sequence | MTIPSQMHTP NPSISNPPVP IAVTTPEYNH RYTYISKPVV KHQRTESFPA SFKFPRSPEE LTDKELQSNK SRAGSFATSK SPTSTFVSPK RTHKSGSIDS TELKEAYDNA NSPMNDVIVF WNKLGNSSDE NFDIASAVES LSPGTVEQQL QNWRKVQSAL TKFEDYRSVS ASKTEALSSP KKQKTKKKSQ RAPAPSLLPA PQLHKKDHKP KKKFGSTGEI LPIKVDSSAL GRPGHKEAVD YGGLNQELSI RAEMKCSHCR SKETPEWRRG PSGSRTLCNA CGLFYSKLIR RHGLKLADKI IAERKEAGRV LDRKIA
|
| |