Gene PICST_27983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27983 
SymbolSUT2 
ID4838413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1774240 
End bp1777906 
Gene Length3667 bp 
Protein Length550 aa 
Translation table12 
GC content38% 
IMG OID640389728 
ProductSugar UpTake (tentative) 
Protein accessionXP_001384295 
Protein GI150865183 
COG category 
COG ID 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.180127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAATTCTTCT ACTTTAAATA AGAGATGTTG ATTCAGCCAA GATGACCTTT CCTAAAGGCT 
TTTGTGATAG TTTCTATTGT GGTCGGAGAG AGCGCAAACT CCAGAAATAG CGGCAGTACC
TGGGAGGTTT GGAGGCTAAT TACATGGTAG CACAAGCAGC ATTAGATCAT TAGTTCGTGG
AGAACTTTAG AAATCTAAGT TGTAACTACT TCCATTAAAA TTAGGAAAAA TATCCCAAGA
AGTTGTGTAG TTACTGATGG AAATTGAAAA TATGTCCTCA TAATTTTTCT CTAAGTAAAT
TCTCAATTGT AAGCGAAAAA GTGTTGTATC GACTTGAAAT TGAATTTAAA TTTACATTTC
CATTTATCAA TGGTTCAATT CACTAAAACC AGAGGACTAA CTTGCTTGGT CGCTATACTG
TTAAACGTGG GCTCTTTGGC GCAGAAGAAG AAAATGCAAA ATGTGAGAGC TAATGGTCAA
TGTTGTAATG AGTTCTGGCA CAGTCAAATA CATAAGAAGG AAGTGCTAAG TCGACATTTA
TTCCTAAACG AGATTCTTTG CACATAGGAA ATTTCCAGTA CATCTATATA TTCATCAATT
GATCTCGGAT GAAAGGTAAA TCTTTGGAAG TTGAGGTAGA CTATTGTGAT ATAAACGTAG
AAAAGGTTTG AATGGAAGTC GTCATCGACG TTAACTCTGT AGTATTATTT AATGGAGGAT
ATTGCGTAGC TTCAAATGTT AGATGCTCAC CTCTAATAAC CTTAGTTGGC GCCATTGGAA
CTACGATCAA TATTTTGCAC CCATTCAACC AACCAGAAAA AAAACATACG TTCCCAAGTC
TTGCATAAGA AGGTTGCCCC AGCAAGTGGT GGACCTTCTG TTTCTAATGT ATGCAATATT
CAACGTGAAA GCTCTATGAT GTAATTTGTA TCTTCAACCG AGGTATTCGC TAAAGGAAAT
GTTCCGATAA CTATCCAGAA ACATGACAGA TGCACAGAAA TCGCGTGCGT TTCTTTTCCG
GAACATTCAG ACTTTATCCG AAATTGGAAA TTTCTTTTTG CGCAGCATCG GACTGAAGAA
CCAATATGCC GGCTTTCCCC GAAACATGAC AGTTAGACCA GCTTTACAAT TCCGGATGTG
AAAGTCACCC CATATACCAG CAAACATTCA GGATGCTTGG AACATGTAAC GTACAGATCA
GTTGGCTCAG ATGCAAAGAC AAACTGGGAG CAGTGCAAAA GGCAACTGTG GTTTTTCCGT
CATGGAAGGG GATCCAGGTC CATGCTGCAC GAAATTTAGG TGCCAGTCCT ATTCAAAAGC
AGATTTCAAT GAGTAACTCT TGAGAAATTC ATTGAAGCAT ATCGAAGTAT CTCCTAGTAC
AACATCAATG TAGTTGCGAG AAAAAAATTG GGTTAGCCTC ATTGCAAATT GAAAATCTTT
TCCGAATTGG GGGCGCAGAG ATGTCATTTG CGCATGTCAC TAAGATTATT TTTTGGGTAT
TTTCCGGCTT AAGAATTTTA CCTCAGCCAT CAATCAAATA TTGCAGCCAT CAAATTGAGT
ATAAATATCG ACAGGAATAA ACCCTATTTT GCAACCTATT TACTTTTCTC TTCTCATCAT
CACACATTAT TCAATACAAT GTCCTCACAA GATTTACCCT CGGGTGCTCA AACCCCAATC
GATGGTTCTT CCATCCTCGA AGATAAAGTT GAGCAAAGTT CGTCCTCAAA TAGCCAAAGT
GATTTAGCTT CCATTCCAGC AACAGGTATC AAAGCCTATC TCTTGGTTTG TTTCTTCTGC
ATGTTGGTTG CCTTTGGTGG ATTCGTATTC GGTTTCGATA CCGGTACAAT TTCCGGTTTC
CTTAATATGT CTGATTTCCT TTCCAGATTT GGTCAAGATG GTTCTGAAGG AAAATATTTG
TCTGATATCA GAGTCGGTTT GATTGTTTCC ATTTTTAACA TTGGTTGTGC AATTGGTGGT
ATTTTCCTTT CTAAGATAGG AGATGTTTAC GGTAGAAGAA TTGGTATCAT TTCAGCTATG
GTTGTCTACG TCGTCGGTAT TATCATCCAG ATCTCGTCCC AAGACAAGTG GTACCAACTT
ACAATTGGAC GTGGAGTTAC AGGATTAGCT GTTGGTACTG TTTCAGTGTT GTCTCCAATG
TTCATTAGTG AAAGTGCTCC AAAGCATTTG AGAGGTACTT TGGTATACTG TTACCAATTA
TGTATCACCT TAGGTATTTT CATTGGTTAC TGTGTCACTT ATGGAACCAA AGATTTAAAT
GATTCAAGAC AATGGAGAGT TCCTTTGGGT TTATGTTTCC TTTGGGCTAT TTTCTTAGTT
GTCGGTATGT TGGCTATGCC TGAATCCCCA AGATTCTTAA TTGAAAAGAA GAGAATCGAA
GAAGCCAAGA AGTCCCTTGC AAGATCCAAC AAGTTATCTC CAGAAGATCC AGGTGTCTAC
ACTGAAGTTC AATTGATTCA GGCTGGTATT GACAGAGAAG CTGCTGCAGG TTCTGCTTCA
TGGATGGAAT TGATCACTGG TAAGCCAGCT ATTTTCAGAA GAGTTATCAT GGGAATTATC
TTACAGTCTT TGCAACAATT AACTGGTGTC AACTATTTCT TCTATTACGG AACTACAATC
TTCCAAGCTG TTGGTTTGCA AGATTCCTTC CAGACTTCCA TCATCTTAGG TACAGTCAAC
TTTCTTTCTA CATTTGTTGG TATTTGGGCC ATTGAAAGAT TTGGAAGAAG ACAATGTTTG
TTAGTCGGTT CTGCTGGTAT GTTCGTTTGT TTCATCATTT ACTCCGTTAT TGGTACAACT
CATTTGTTCA TTGATGGAGT AGTAGATAAC GACAACACCC GTCAACTGTC TGGTAATGCT
ATGATCTTTA TCACTTGTTT GTTCATCTTC TTCTTTGCCT GTACATGGGC TGGAGGTGTT
TTTACCATCA TTTCCGAATC ATATCCATTG AGAATCAGAT CCAAGGCAAT GTCTATTGCT
ACTGCTGCTA ACTGGATGTG GGGCTTCTTG ATTTCCTTCT GCACTCCATT CATTGTTAAT
GCCATCAACT TCAAGTTCGG CTTTGTGTTT ACTGGTTGTT TACTCTTTTC GTTCTTCTAT
GTCTACTTCT TTGTCAGCGA AACCAAAGGT TTGTCGTTGG AAGAAGTTGA TGAGTTGTAC
GCTGAAGGTA TTGCACCATG GAAGTCTGGT GCATGGGTTC CTCCTTCTGC CCAACAACAA
ATGCAAAACT CCACTTATGG TGCCGAAGCA AAAGAGCAAG AGCAAGTTTA GCTTTACGAT
TAATGTTTTT CTCCCCTGCA TGACTTTTTA ACGTTTAGAA TATAGACACT ATAGATTTAC
AAAAAGGTTA TACCTTTAAA TGAACTTTTA TGATGAAGAT TGATACACTA TAAACCAAGA
ACTGTAATAA GGTCATTTGT TTTTGTACTA CTGATAGATT CAAGTACTCC GAATTAACGT
ATTCTAAACC ATATCTATTT CATTTTCTAA ATTCCAGTCC AGAGGCATTG GTTGTCAATA
TAGATGGATT CGGTTTGAGA GATATTCAGA CTACTATTTC CAACATGGAC CTTGTAATTT
CCTTTTTGAA GGGACCACTG ATTCTGATAT TCATCAAAGA AGGAAAATGT ATCCTTGACA
AGAATTC
 
Protein sequence
MSSQDLPSGA QTPIDGSSIL EDKVEQSSSS NSQSDLASIP ATGIKAYLLV CFFCMLVAFG 
GFVFGFDTGT ISGFLNMSDF LSRFGQDGSE GKYLSDIRVG LIVSIFNIGC AIGGIFLSKI
GDVYGRRIGI ISAMVVYVVG IIIQISSQDK WYQLTIGRGV TGLAVGTVSV LSPMFISESA
PKHLRGTLVY CYQLCITLGI FIGYCVTYGT KDLNDSRQWR VPLGLCFLWA IFLVVGMLAM
PESPRFLIEK KRIEEAKKSL ARSNKLSPED PGVYTEVQLI QAGIDREAAA GSASWMELIT
GKPAIFRRVI MGIILQSLQQ LTGVNYFFYY GTTIFQAVGL QDSFQTSIIL GTVNFLSTFV
GIWAIERFGR RQCLLVGSAG MFVCFIIYSV IGTTHLFIDG VVDNDNTRQS SGNAMIFITC
LFIFFFACTW AGGVFTIISE SYPLRIRSKA MSIATAANWM WGFLISFCTP FIVNAINFKF
GFVFTGCLLF SFFYVYFFVS ETKGLSLEEV DELYAEGIAP WKSGAWVPPS AQQQMQNSTY
GAEAKEQEQV