Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_27983 |
Symbol | SUT2 |
ID | 4838413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1774240 |
End bp | 1777906 |
Gene Length | 3667 bp |
Protein Length | 550 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640389728 |
Product | Sugar UpTake (tentative) |
Protein accession | XP_001384295 |
Protein GI | 150865183 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.180127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAATTCTTCT ACTTTAAATA AGAGATGTTG ATTCAGCCAA GATGACCTTT CCTAAAGGCT TTTGTGATAG TTTCTATTGT GGTCGGAGAG AGCGCAAACT CCAGAAATAG CGGCAGTACC TGGGAGGTTT GGAGGCTAAT TACATGGTAG CACAAGCAGC ATTAGATCAT TAGTTCGTGG AGAACTTTAG AAATCTAAGT TGTAACTACT TCCATTAAAA TTAGGAAAAA TATCCCAAGA AGTTGTGTAG TTACTGATGG AAATTGAAAA TATGTCCTCA TAATTTTTCT CTAAGTAAAT TCTCAATTGT AAGCGAAAAA GTGTTGTATC GACTTGAAAT TGAATTTAAA TTTACATTTC CATTTATCAA TGGTTCAATT CACTAAAACC AGAGGACTAA CTTGCTTGGT CGCTATACTG TTAAACGTGG GCTCTTTGGC GCAGAAGAAG AAAATGCAAA ATGTGAGAGC TAATGGTCAA TGTTGTAATG AGTTCTGGCA CAGTCAAATA CATAAGAAGG AAGTGCTAAG TCGACATTTA TTCCTAAACG AGATTCTTTG CACATAGGAA ATTTCCAGTA CATCTATATA TTCATCAATT GATCTCGGAT GAAAGGTAAA TCTTTGGAAG TTGAGGTAGA CTATTGTGAT ATAAACGTAG AAAAGGTTTG AATGGAAGTC GTCATCGACG TTAACTCTGT AGTATTATTT AATGGAGGAT ATTGCGTAGC TTCAAATGTT AGATGCTCAC CTCTAATAAC CTTAGTTGGC GCCATTGGAA CTACGATCAA TATTTTGCAC CCATTCAACC AACCAGAAAA AAAACATACG TTCCCAAGTC TTGCATAAGA AGGTTGCCCC AGCAAGTGGT GGACCTTCTG TTTCTAATGT ATGCAATATT CAACGTGAAA GCTCTATGAT GTAATTTGTA TCTTCAACCG AGGTATTCGC TAAAGGAAAT GTTCCGATAA CTATCCAGAA ACATGACAGA TGCACAGAAA TCGCGTGCGT TTCTTTTCCG GAACATTCAG ACTTTATCCG AAATTGGAAA TTTCTTTTTG CGCAGCATCG GACTGAAGAA CCAATATGCC GGCTTTCCCC GAAACATGAC AGTTAGACCA GCTTTACAAT TCCGGATGTG AAAGTCACCC CATATACCAG CAAACATTCA GGATGCTTGG AACATGTAAC GTACAGATCA GTTGGCTCAG ATGCAAAGAC AAACTGGGAG CAGTGCAAAA GGCAACTGTG GTTTTTCCGT CATGGAAGGG GATCCAGGTC CATGCTGCAC GAAATTTAGG TGCCAGTCCT ATTCAAAAGC AGATTTCAAT GAGTAACTCT TGAGAAATTC ATTGAAGCAT ATCGAAGTAT CTCCTAGTAC AACATCAATG TAGTTGCGAG AAAAAAATTG GGTTAGCCTC ATTGCAAATT GAAAATCTTT TCCGAATTGG GGGCGCAGAG ATGTCATTTG CGCATGTCAC TAAGATTATT TTTTGGGTAT TTTCCGGCTT AAGAATTTTA CCTCAGCCAT CAATCAAATA TTGCAGCCAT CAAATTGAGT ATAAATATCG ACAGGAATAA ACCCTATTTT GCAACCTATT TACTTTTCTC TTCTCATCAT CACACATTAT TCAATACAAT GTCCTCACAA GATTTACCCT CGGGTGCTCA AACCCCAATC GATGGTTCTT CCATCCTCGA AGATAAAGTT GAGCAAAGTT CGTCCTCAAA TAGCCAAAGT GATTTAGCTT CCATTCCAGC AACAGGTATC AAAGCCTATC TCTTGGTTTG TTTCTTCTGC ATGTTGGTTG CCTTTGGTGG ATTCGTATTC GGTTTCGATA CCGGTACAAT TTCCGGTTTC CTTAATATGT CTGATTTCCT TTCCAGATTT GGTCAAGATG GTTCTGAAGG AAAATATTTG TCTGATATCA GAGTCGGTTT GATTGTTTCC ATTTTTAACA TTGGTTGTGC AATTGGTGGT ATTTTCCTTT CTAAGATAGG AGATGTTTAC GGTAGAAGAA TTGGTATCAT TTCAGCTATG GTTGTCTACG TCGTCGGTAT TATCATCCAG ATCTCGTCCC AAGACAAGTG GTACCAACTT ACAATTGGAC GTGGAGTTAC AGGATTAGCT GTTGGTACTG TTTCAGTGTT GTCTCCAATG TTCATTAGTG AAAGTGCTCC AAAGCATTTG AGAGGTACTT TGGTATACTG TTACCAATTA TGTATCACCT TAGGTATTTT CATTGGTTAC TGTGTCACTT ATGGAACCAA AGATTTAAAT GATTCAAGAC AATGGAGAGT TCCTTTGGGT TTATGTTTCC TTTGGGCTAT TTTCTTAGTT GTCGGTATGT TGGCTATGCC TGAATCCCCA AGATTCTTAA TTGAAAAGAA GAGAATCGAA GAAGCCAAGA AGTCCCTTGC AAGATCCAAC AAGTTATCTC CAGAAGATCC AGGTGTCTAC ACTGAAGTTC AATTGATTCA GGCTGGTATT GACAGAGAAG CTGCTGCAGG TTCTGCTTCA TGGATGGAAT TGATCACTGG TAAGCCAGCT ATTTTCAGAA GAGTTATCAT GGGAATTATC TTACAGTCTT TGCAACAATT AACTGGTGTC AACTATTTCT TCTATTACGG AACTACAATC TTCCAAGCTG TTGGTTTGCA AGATTCCTTC CAGACTTCCA TCATCTTAGG TACAGTCAAC TTTCTTTCTA CATTTGTTGG TATTTGGGCC ATTGAAAGAT TTGGAAGAAG ACAATGTTTG TTAGTCGGTT CTGCTGGTAT GTTCGTTTGT TTCATCATTT ACTCCGTTAT TGGTACAACT CATTTGTTCA TTGATGGAGT AGTAGATAAC GACAACACCC GTCAACTGTC TGGTAATGCT ATGATCTTTA TCACTTGTTT GTTCATCTTC TTCTTTGCCT GTACATGGGC TGGAGGTGTT TTTACCATCA TTTCCGAATC ATATCCATTG AGAATCAGAT CCAAGGCAAT GTCTATTGCT ACTGCTGCTA ACTGGATGTG GGGCTTCTTG ATTTCCTTCT GCACTCCATT CATTGTTAAT GCCATCAACT TCAAGTTCGG CTTTGTGTTT ACTGGTTGTT TACTCTTTTC GTTCTTCTAT GTCTACTTCT TTGTCAGCGA AACCAAAGGT TTGTCGTTGG AAGAAGTTGA TGAGTTGTAC GCTGAAGGTA TTGCACCATG GAAGTCTGGT GCATGGGTTC CTCCTTCTGC CCAACAACAA ATGCAAAACT CCACTTATGG TGCCGAAGCA AAAGAGCAAG AGCAAGTTTA GCTTTACGAT TAATGTTTTT CTCCCCTGCA TGACTTTTTA ACGTTTAGAA TATAGACACT ATAGATTTAC AAAAAGGTTA TACCTTTAAA TGAACTTTTA TGATGAAGAT TGATACACTA TAAACCAAGA ACTGTAATAA GGTCATTTGT TTTTGTACTA CTGATAGATT CAAGTACTCC GAATTAACGT ATTCTAAACC ATATCTATTT CATTTTCTAA ATTCCAGTCC AGAGGCATTG GTTGTCAATA TAGATGGATT CGGTTTGAGA GATATTCAGA CTACTATTTC CAACATGGAC CTTGTAATTT CCTTTTTGAA GGGACCACTG ATTCTGATAT TCATCAAAGA AGGAAAATGT ATCCTTGACA AGAATTC
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Protein sequence | MSSQDLPSGA QTPIDGSSIL EDKVEQSSSS NSQSDLASIP ATGIKAYLLV CFFCMLVAFG GFVFGFDTGT ISGFLNMSDF LSRFGQDGSE GKYLSDIRVG LIVSIFNIGC AIGGIFLSKI GDVYGRRIGI ISAMVVYVVG IIIQISSQDK WYQLTIGRGV TGLAVGTVSV LSPMFISESA PKHLRGTLVY CYQLCITLGI FIGYCVTYGT KDLNDSRQWR VPLGLCFLWA IFLVVGMLAM PESPRFLIEK KRIEEAKKSL ARSNKLSPED PGVYTEVQLI QAGIDREAAA GSASWMELIT GKPAIFRRVI MGIILQSLQQ LTGVNYFFYY GTTIFQAVGL QDSFQTSIIL GTVNFLSTFV GIWAIERFGR RQCLLVGSAG MFVCFIIYSV IGTTHLFIDG VVDNDNTRQS SGNAMIFITC LFIFFFACTW AGGVFTIISE SYPLRIRSKA MSIATAANWM WGFLISFCTP FIVNAINFKF GFVFTGCLLF SFFYVYFFVS ETKGLSLEEV DELYAEGIAP WKSGAWVPPS AQQQMQNSTY GAEAKEQEQV
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