| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88728 |
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| Symbol | |
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| ID | 4837938 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1267661 |
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| End bp | 1271344 |
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| Gene Length | 3684 bp |
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| Protein Length | 1141 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389253 |
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| Product | predicted protein |
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| Protein accession | XP_001383527 |
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| Protein GI | 150864628 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.690875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.12515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAT CGTTTGATGA CTTCTTGAAA CAGCAGCAGG GCCAAAAAGG CTCTGCTGGC
CGTGGTAATT CTAGATTCAC CAATAACCAG TATAATAGCC AGCACCAAAA TAACCAGTAC
CCAAATAATC AGTACCAGAA TAACCAGTAT AATAATCAAT ACAATAACCA GTACAATGCT
GGAAATCAGG GTTATGCTTC TAACTACAAC CAATTGAACC AAGGTTTTGG CAACAATCAG
TACAACCGTG GAGGTTTCAG AGGCAACTAC CAGGCCGGTG GATCTTTTCC ACAGACCCCC
AACGAGTCTT TGCCCAATTC TGGAACTGCC ACCCCTAAGA CTCCTAATGC AAACGCTTCA
AGTACTTCGT TGAATTCTCT TTCGTCTGCC TTAAGTAAGC TCAATGTAGG AGACGTTCCC
TTCCAGGAAA ACTTGGCCAA TCTTGACAAG GCAGCAAAGA TTGCCGACGT CAGACCAGAA
GTGGATGCTA TCACTGAGAC ATTTGTTGTC GAATCTATAT CCTCCGTCAA TGAGTACAAG
CTCAACAATA TTGTCAAGTC TTTGGCCAAG CCCAAGAACT CAGCTTTTGT CAGAGAAGCT
TCGCTTTTGA TTATCCAGCA ATTGGCTGTG AAGCTTGGGG GTCAAACTCC TAAGGAGTCG
TACTTGGTCC AGTTTTTCCT GACCGCATAC GACTTATTTG CTGATAAAGA CAAAAATGTT
GTCAAAGCTG CAAAGTCTGC CACCGACACT TTATACGGGA TCTTTCCCGT AGAAGCTCTT
GGTACAATTG TGCTTGACGA ATTTTTAAAA TACTTGTCGT CGTCGGCTAA GTGGAATTCG
AAGGTCGCCG CTTTGGCCAC TTTTGATAGA TTGGTAGAGG AAGTTCCTGC TGATTTATTG
GAATTGACAT TTGTTAGAGC CGTTCCTGTC TTAACAGACT TGGCTACGGA TTTCAAACCT
GAATTAGCCA AGCACGGTTT GTCCTCTTTG AAGAAATTTG TCAAAGTATT AGACAACTTA
GATTTGCAGA ACAAGTACGA TTTGATTGTA GAGACCTTGG CTGATCCCTC TAAGGTCACC
GAGTGTATCA AGAACTTGTC TTCTGTCACG TTTGTAGCTG AAGTGACAGA ACCTGCTTTG
TCATTGTTGG TTCCGATTTT GGACAAGTCT TTGAAGATGT CATCCTCTTC CAACGATCAG
TTGAGGCAAA CTGTTACTGT TACAGAGAAC TTGACCAGAT TGGTTAACAA CAAGAGAGAA
ATCGAAACGT TCATCCCCAT CTTGTTGCCT GGTGTAGAAA AAGTCGTCAA CAATGCATCT
TTGCCTGAAG TGAGAGACTT GGGTGCCAAA GCCTTGAAGG TGTTGAAGGA TGCTGAAAGT
GAGCAGACAG ACGGAAAGTT CCATGGCAGA ATCACTTTGG AACAAGCCCA AAAATTCTAT
ATTGAAAACC TCGACTCTGA GTCTGCAGCC ATTGTACATA CTTTGGACTT TTCTGACGAC
ATCATAGCTC AATACTTGAG CAAGGTCTTG CAAGCCGATG CTCATGTCAA TGATTGGAAG
CGTTTGAAGG AATACTTAGA GTTACTTGTA AACACTTCTG AATCCATTTC TGAAGAGCAA
AAGAATCAAT ATGTCGACAA GGTTATTGAA AACTTGAGAA ACTTGTACGA CGCCGACACT
GGCAAGTCCA ACGAAGACGA CGATGGTGCC ATAGAGATCG TCAACGCCGA CTTCTCGTTG
GCATATGGGT CTCGTATGTT GTTGAACAAG ACAACTTTGC GTCTTTTGAA GGGTCACCGT
TATGGTTTAT GTGGAAGAAA CGGTGCTGGT AAGTCAACTT TGATGAGAGC TATTTCCAAG
GGACAATTAG AAGGATTCCC ATCAGCTGAC GAGTTGCGAA CTTGTTTTGT TGAACACAAA
TTACAGGGCT CCGAAGCCGA TATGGACTTA GTGAGCTTCA TTGCTTCGGA TCCTGAGTTA
GCTGGTATTG AAAGAAGCCA AATCTCAGAA GCTTTGATCA ATGTTGGTTT CACTCAAGAA
AGATTGGAGC AACAAGTCGG TTCTCTTTCT GGTGGTTGGA AGATGAAGTT GGAGTTGGCC
AGGGCAATGT TGATGAAGGC AGATGTGCTC TTATTGGATG AACCAACCAA TCACTTGGAT
GTTGCTAATG TCAAATGGTT GGAAGATTAC TTGGTGGAAC ACACTGAGAT TACGTCCTTA
ATTGTTTCGC ATGACTCCGG TTTCTTGGAT GCTGTTTGTA CTGACATTAT CCACTACGAA
AACAAGAAAT TGGCTTACTA CAAGGGTAAC TTGTCTGAGT TCGTCAAGGT CAAGCCAGAA
GGAAAGTCTT ATTACACTTT ATCTGACTCT GTAGTCCAGA TGCACTTCCC ACCACCTGGT
ATTTTAACCG GGGTTAAGTC CAACACTCGT TCTGTGGCCC GTATGTCTAA CGTTACTTTC
TGCTATCCTG GTGCTGCTAA GCCTCAGATG AAGAACGTTT CCTGTTCGTT GTCGTTGTCG
TCTAGAGTTG GTATCATTGG TCCTAATGGT GCTGGTAAGT CCACTTTGAT CAAGTTATTG
ACTGGGGAGT TGGTTCCTAA CGAAGGTAAG GTTGAGAAGC ATCCTAACTT GAGAATCGGA
TATATTGCCC AGCACGCTTT GCAACACGTA GAACAGCACA AGGAAAAGAC TGCCAATCAG
TACTTGCAAT GGCGTTACCG TTTCGGGGAC GATCGTGAAG TCTTGTTGAA GGACTCGCGT
AAGATTTCTG AAGAGGAAAA GGAGCAGATG GCTAAGGAAA TAGATGTCGA TGACGGAAGG
GGACCAAGAG CCATCGAAGC TATTGTAGGT AGACAGAAGT TGAAGAAGTC GTTCCAGTAC
GAAGTCAAGT GGAAGTTCTG GTTGCCCAAA TACAACTCGT GGGTACCCAG AGAAGTTTTG
TTGGAACACG GATTCGACAA GTTGATCCAG AACTTTGACG ATCACGAAGC TTCTAGGGAA
GGTTTGGGTT ACAGAGAGCT CACACCATCT GTGATTAGAA AGCATTTCGA AGACGTCGGT
TTGGATGGTG ACATTGCTGA CCACACTCCT ATGGGCTCAT TGTCTGGAGG TCAATTGGTG
AAGGTTGTCA TTGCTGGGGC CATGTGGAAT AACCCCCACT TGTTAGTCTT GGATGAACCT
ACCAATTATT TGGACAGAGA CTCCTTGGGA GGTTTGGCCA TGGCTATCAG AGAATGGGCT
GGAGGTGTGG TGATGATTTC ACACAACAAT GAATTCGTCG GAGCCTTGTG TCCTGAACAG
TGGCACGTAG CAAACGGTGA GTTTATCCAG AAGGGCACTG TAGCTGTAGA CAATGCTCGT
TTCGAAGATC AGGGAGGAGA CTCTACTGGT ACTTCTCCTG CCATCTCTAG ATCGTCAACT
CCTAGACCAG ATGATGATGA TTCTCCTGCC AACATCAAGG TTAGGCAGAG AAAGAAGAAG
ATGACAAGAA ACGAAAAGAA GTTGCAGGCT GAAAGAAGAA GATTGAGATA CATTGAATGG
TTGTCGTCTC CAAAGGGTAC TCCAAAGCCT ATTGATACTG ATGACGAAGA TGAGTAGACA
GTTTGTTTAC TATGATAGAA TAGCATAGCA GAATTTATTC CTTATTTAAT TTGACAAAGT
CGGATAATAG ATTATTAATG TTCA
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| Protein sequence | MSQSFDDFLK QQQGQKGSAG RGNSRFTNNQ GNYQAGGSFP QTPNESLPNS GTATPKTPNA
NASSTSLNSL SSALSKLNVG DVPFQENLAN LDKAAKIADV RPEVDAITET FVVESISSVN
EYKLNNIVKS LAKPKNSAFV REASLLIIQQ LAVKLGGQTP KESYLVQFFS TAYDLFADKD
KNVVKAAKSA TDTLYGIFPV EALGTIVLDE FLKYLSSSAK WNSKVAALAT FDRLVEEVPA
DLLELTFVRA VPVLTDLATD FKPELAKHGL SSLKKFVKVL DNLDLQNKYD LIVETLADPS
KVTECIKNLS SVTFVAEVTE PALSLLVPIL DKSLKMSSSS NDQLRQTVTV TENLTRLVNN
KREIETFIPI LLPGVEKVVN NASLPEVRDL GAKALKVLKD AESEQTDGKF HGRITLEQAQ
KFYIENLDSE SAAIVHTLDF SDDIIAQYLS KVLQADAHVN DWKRLKEYLE LLVNTSESIS
EEQKNQYVDK VIENLRNLYD ADTGKSNEDD DGAIEIVNAD FSLAYGSRML LNKTTLRLLK
GHRYGLCGRN GAGKSTLMRA ISKGQLEGFP SADELRTCFV EHKLQGSEAD MDLVSFIASD
PELAGIERSQ ISEALINVGF TQERLEQQVG SLSGGWKMKL ELARAMLMKA DVLLLDEPTN
HLDVANVKWL EDYLVEHTEI TSLIVSHDSG FLDAVCTDII HYENKKLAYY KGNLSEFVKV
KPEGKSYYTL SDSVVQMHFP PPGILTGVKS NTRSVARMSN VTFCYPGAAK PQMKNVSCSL
SLSSRVGIIG PNGAGKSTLI KLLTGELVPN EGKVEKHPNL RIGYIAQHAL QHVEQHKEKT
ANQYLQWRYR FGDDREVLLK DSRKISEEEK EQMAKEIDVD DGRGPRAIEA IVGRQKLKKS
FQYEVKWKFW LPKYNSWVPR EVLLEHGFDK LIQNFDDHEA SREGLGYREL TPSVIRKHFE
DVGLDGDIAD HTPMGSLSGG QLVKVVIAGA MWNNPHLLVL DEPTNYLDRD SLGGLAMAIR
EWAGGVVMIS HNNEFVGALC PEQWHVANGE FIQKGTVAVD NARFEDQGGD STGTSPAISR
SSTPRPDDDD SPANIKVRQR KKKMTRNEKK LQAERRRLRY IEWLSSPKGT PKPIDTDDED
E
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