| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88710 |
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| Symbol | GLC3 |
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| ID | 4837935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 37418 |
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| End bp | 39799 |
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| Gene Length | 2382 bp |
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| Protein Length | 701 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389250 |
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| Product | alpha-1,4-glucan branching enzyme |
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| Protein accession | XP_001383281 |
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| Protein GI | 150864458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.314091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TAGCAAGCTA TATAATTGCC TGTATCTACT CAATTGGATT TCATCAGGCT TTTATAAGAA
CGTAGTGGAA GTTTTCAATT AGTTTCGTTC GATTTCTTTG ATCTTATCTA CATTTTTCAG
CCCTCGACCT CCCACTAAGT TCTCCGCAAA ATGTCTACAG ACAACAAACT GCTCATCAAA
GGTGCCCTCG ACGTCGATCC ATGGTTGGAA CCTTACTCGC AGCCACTTAT CGACCGTCAG
CTTAAGTTCC AAAAATGGTA CGCTGACTTG AAGCTGCTGG AAACTTCTCT TTTCCAATTC
GCTTCGTCGT ACCAGACCTA TGGTGTCCAC GGTAACTGGG ACACCAAGGA AGTGGTGGTG
ACTCAATACG TTCCCGATAT CCAGGAGGTC TCTTTGGTAG GAGAATTCAA TAATTGGGAT
GTTTCTGCTC ACAAATTGAA GAAAGTCAAC AATTTTGGCT TGTGGTCACT TACCATTCCT
CCAGTCGATG GAGATTTTGC AATCAAACAT GATTCCAAGT ACAAGATCTC GATGAAATTG
CCCTCAGGCG AACAGATTTA CCGTTTGGAT CCGTGGTTGA GAAGAGCTAC CCCTGCCACA
GAAACCACTT TGTACGAAGG CCGTTTCTGG AACCCTTCGC CAGCTGAAAC CTACAAGTTC
AAGAACAAGA GAGCAACCTT CAACTCCACT GAGGGTATCA GAATCTACGA AGCCCACATC
GGTATCTCGA CTCCAGAACC CACCGTTGGT TCCTACAAGA ACTTTACGGA AAACATTTTG
CCCATCATCC ACAAGCTGGG CTACAACACC ATCCAGTTGA TGGCAGTCAT GGAACACGCC
TACTACGCTT CCTTTGGCTA CCAGGTCACC AACTTCTTTG CTATTTCGTC TCGTTTTGGA
ACTCCAGAGG AATTGAAAGA GTTGATCGAT ACAGCACACG GCCTTGGAAT CAAGGTGTTG
TTGGATGTTG TTCATTCGCA TTCGTCTAAG AACGTCGAAG ATGGTTTGAA CATGTTCAAT
GGAACAGACC ACTACTTGTT CCACGGCGGA CCCAAGGGTA ACCATGATTT GTGGGACTCC
AGGTTGTTCA ATTACGAAAA CCACGAGACA TTGAGATTCC TCTTGTCCAA TTTAAAGTTC
TTTATCGACG TCTATCAGTT TGACGGGTTC AGATTCGACG GAGTCACCTC CATGATGTAC
AAACACCACG GATTAAGTTT CGGATTCTCG GGTGACTACA ATGAGTACTT CAACCCTGAA
TGGGTTGATA CAGATGCCGT GGTTTACTTG ATGCTTGCCC ATCAGTTATT GCTGGAGATC
AGCGAGAAAG AAGACGGCTT CAAGTTCTTC TCCATTGCCG AAGATGTCTC GGGTATGCCT
ACTCTTTGTT TGACTATTCC TGAAGGTGGT ATTGGATTTG ACTACAGATT GTCCATGGCC
ATTCCCGACA TGTGGATCAA GATTTTGAAA CACTTGTCGG ACGAACAATG GGATCTCCAT
TCTATCGTCC ATACCTTGAC AAACAGAAGA TATAAAGAAA AGTGTATTGC TTACTGCGAG
TCTCACGATC AAGCTTTGGT CGGCGACAAG ACCATTGCAT TCTGGCTCAT GGACAAGGAA
ATGTACACGC ACATGTCAGT TCTTTCTCCA CTCACTCCAA TCATCGACAG AGGTCTTTCC
TTACACAAAT TGATTCGTTT GCTTACTTTT GGTTTAGGAG GTGAAGGGTA CTTAAACTTT
GAAGGTAATG AATTCGGCCA TCCTGAGTGG TTAGATTTCC CCAGGGTTGG AAACAACGAG
TCGTACCACT ATGCCAGAAG ACAGTTCAAC CTTATTAAGG ACGACTTGTT GCGTTACAAG
TTCTTGTATG CATTTGACGC TGGAATGCTC TCGTTAGACA GCAAGTATGG TGTCTTGGAC
AAACCCCAGG CTTATGTCTC ATTGAAGCAC GAAGGTGACA AGGTCCTTGT TTTTGAAAGA
AATGGCCTTC TCTTTGTGTT CAACTTCCAC CACAGCCAGT CCTTCCCAGA CTACAAGATT
GGTGTTGAAA CTGCTGGTAC CTACCAGATT GTTTTGAACT CTGACGAAGC GCAATATGGT
GGTCACGACA GAATCCAAGA AGTCGATGCC AACGGCAAGC CTGTTCAGTA TTTCACCAAC
AATGATCCAT GGAACAACAG ATCGAATTCG ATGATGGTAT ACATTCCAAG CAGAACTGCT
ATTGTCTTGC AACTTAAAGA CAAGATCAAA GCTTAATTTT TCAATAAAAA AATAGTCCTC
AAGAAAATCC GCCAGATTTT CAAAGGATAC AATTAAATCA CATATAGCTA TAGCAGCCCA
TTTACATATA CATTTTATGG AGGATAGACA TTATGGCTTG TT
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| Protein sequence | MSTDNKSLIK GALDVDPWLE PYSQPLIDRQ LKFQKWYADL KSSETSLFQF ASSYQTYGVH
GNWDTKEVVV TQYVPDIQEV SLVGEFNNWD VSAHKLKKVN NFGLWSLTIP PVDGDFAIKH
DSKYKISMKL PSGEQIYRLD PWLRRATPAT ETTLYEGRFW NPSPAETYKF KNKRATFNST
EGIRIYEAHI GISTPEPTVG SYKNFTENIL PIIHKSGYNT IQLMAVMEHA YYASFGYQVT
NFFAISSRFG TPEELKELID TAHGLGIKVL LDVVHSHSSK NVEDGLNMFN GTDHYLFHGG
PKGNHDLWDS RLFNYENHET LRFLLSNLKF FIDVYQFDGF RFDGVTSMMY KHHGLSFGFS
GDYNEYFNPE WVDTDAVVYL MLAHQLLSEI SEKEDGFKFF SIAEDVSGMP TLCLTIPEGG
IGFDYRLSMA IPDMWIKILK HLSDEQWDLH SIVHTLTNRR YKEKCIAYCE SHDQALVGDK
TIAFWLMDKE MYTHMSVLSP LTPIIDRGLS LHKLIRLLTF GLGGEGYLNF EGNEFGHPEW
LDFPRVGNNE SYHYARRQFN LIKDDLLRYK FLYAFDAGML SLDSKYGVLD KPQAYVSLKH
EGDKVLVFER NGLLFVFNFH HSQSFPDYKI GVETAGTYQI VLNSDEAQYG GHDRIQEVDA
NGKPVQYFTN NDPWNNRSNS MMVYIPSRTA IVLQLKDKIK A
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