Gene PICST_88634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_88634 
Symbol 
ID4838113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1210717 
End bp1211799 
Gene Length1083 bp 
Protein Length360 aa 
Translation table12 
GC content47% 
IMG OID640389428 
Productpredicted protein 
Protein accessionXP_001383515 
Protein GI150864619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.66432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCAG AAGAGAACGC GTTGGCCAAT ATCCGCAAGT ATGCCGTTCG CCATTTCCAG 
GGCCATCCCG AGTCTGTCTG GCACAAGCTC CCGATCTCAC GAAGGCTGTC AGTGTTCGTC
TTGCTTTTTT TGGGCCACTT GGGTGAACTC AGGGTGATTC TCACCAAGCG CTCCAGAAAG
CTCCGCAGTT TCCCCGGTCA CATTTCACTT CCTGGCGGAA AGGCAGACGA TGGTTTAGAG
CTTGAATGGC ACGTAGCACG TAGAGAAATG GAAGAAGAAA TAGGACTCTC TGCCAACAAC
GACTTGTTGC TCAAAAACTA CGGTTTCACC ATTGACCATC TCAACATTTT GCCCAGCTAT
TTGCTGCGGA CGTTTTCTGC CGTGCGGCCG TGCATCGGTT TCATGAATTT TAGATCCAAT
GTAGATTCCG AGCTATTCTC ACAATTGAAG CTCAACCTAA ATCCCGGTGA ATCTTCAAGT
ATCTTTTCCT GTCCCCTCAA GGACTTTTTG TATCCTATTC TGGAAGAAGA GTCGCTCGAG
CTGCTTGAAA GATCGCTGTA TAGAATCAAA TGGGGCGGAA TTCCCTGGAA TTTGCGGTCC
TACACCTTCC TTCAAAGCAA CGAAAACGAA GCTCCCTGGC TTAAAGACAT CGTCGACTTG
TCAGCAACAG AAGAGGAGGA TGAAATATCG GACATAGATG AGGAAGAAAA GCGTAGCGTA
ACTCCCCCAC CAACTGAAGC TCACAAGTTT AAACACAAGA GGCAGAAAAA CTTGTCTGCA
TGGGGTCGTT TGGGCTCACG TAGGCATGTA GAGACCAATG AGAAGATATA TGATGTATGG
GGACTCACAG CCAACATTCT TCACGATTTG GCAGATGTGG CGTACAGAGG ACCTCCGGAG
AGGGAGATAG GCGAGGAGGA GTTGATATAC GCCATTTGGA AGTACGGAAA CCAGATGAAA
ACCAAGAAGA GGTCTGAAGC TGAAGTCAAG CTTATTGAGT CTAAGACTGC TGGTGATTAT
GGATTCGGAG AGATATTGCC CAGGGTTGAG TTCAATAAGT TGAAACAGAT ATACAAGTTG
TGA
 
Protein sequence
MVSEENALAN IRKYAVRHFQ GHPESVWHKL PISRRSSVFV LLFLGHLGEL RVILTKRSRK 
LRSFPGHISL PGGKADDGLE LEWHVARREM EEEIGLSANN DLLLKNYGFT IDHLNILPSY
LSRTFSAVRP CIGFMNFRSN VDSELFSQLK LNLNPGESSS IFSCPLKDFL YPISEEESLE
SLERSSYRIK WGGIPWNLRS YTFLQSNENE APWLKDIVDL SATEEEDEIS DIDEEEKRSV
TPPPTEAHKF KHKRQKNLSA WGRLGSRRHV ETNEKIYDVW GLTANILHDL ADVAYRGPPE
REIGEEELIY AIWKYGNQMK TKKRSEAEVK LIESKTAGDY GFGEILPRVE FNKLKQIYKL