Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_88634 |
Symbol | |
ID | 4838113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1210717 |
End bp | 1211799 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640389428 |
Product | predicted protein |
Protein accession | XP_001383515 |
Protein GI | 150864619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.66432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTCAG AAGAGAACGC GTTGGCCAAT ATCCGCAAGT ATGCCGTTCG CCATTTCCAG GGCCATCCCG AGTCTGTCTG GCACAAGCTC CCGATCTCAC GAAGGCTGTC AGTGTTCGTC TTGCTTTTTT TGGGCCACTT GGGTGAACTC AGGGTGATTC TCACCAAGCG CTCCAGAAAG CTCCGCAGTT TCCCCGGTCA CATTTCACTT CCTGGCGGAA AGGCAGACGA TGGTTTAGAG CTTGAATGGC ACGTAGCACG TAGAGAAATG GAAGAAGAAA TAGGACTCTC TGCCAACAAC GACTTGTTGC TCAAAAACTA CGGTTTCACC ATTGACCATC TCAACATTTT GCCCAGCTAT TTGCTGCGGA CGTTTTCTGC CGTGCGGCCG TGCATCGGTT TCATGAATTT TAGATCCAAT GTAGATTCCG AGCTATTCTC ACAATTGAAG CTCAACCTAA ATCCCGGTGA ATCTTCAAGT ATCTTTTCCT GTCCCCTCAA GGACTTTTTG TATCCTATTC TGGAAGAAGA GTCGCTCGAG CTGCTTGAAA GATCGCTGTA TAGAATCAAA TGGGGCGGAA TTCCCTGGAA TTTGCGGTCC TACACCTTCC TTCAAAGCAA CGAAAACGAA GCTCCCTGGC TTAAAGACAT CGTCGACTTG TCAGCAACAG AAGAGGAGGA TGAAATATCG GACATAGATG AGGAAGAAAA GCGTAGCGTA ACTCCCCCAC CAACTGAAGC TCACAAGTTT AAACACAAGA GGCAGAAAAA CTTGTCTGCA TGGGGTCGTT TGGGCTCACG TAGGCATGTA GAGACCAATG AGAAGATATA TGATGTATGG GGACTCACAG CCAACATTCT TCACGATTTG GCAGATGTGG CGTACAGAGG ACCTCCGGAG AGGGAGATAG GCGAGGAGGA GTTGATATAC GCCATTTGGA AGTACGGAAA CCAGATGAAA ACCAAGAAGA GGTCTGAAGC TGAAGTCAAG CTTATTGAGT CTAAGACTGC TGGTGATTAT GGATTCGGAG AGATATTGCC CAGGGTTGAG TTCAATAAGT TGAAACAGAT ATACAAGTTG TGA
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Protein sequence | MVSEENALAN IRKYAVRHFQ GHPESVWHKL PISRRSSVFV LLFLGHLGEL RVILTKRSRK LRSFPGHISL PGGKADDGLE LEWHVARREM EEEIGLSANN DLLLKNYGFT IDHLNILPSY LSRTFSAVRP CIGFMNFRSN VDSELFSQLK LNLNPGESSS IFSCPLKDFL YPISEEESLE SLERSSYRIK WGGIPWNLRS YTFLQSNENE APWLKDIVDL SATEEEDEIS DIDEEEKRSV TPPPTEAHKF KHKRQKNLSA WGRLGSRRHV ETNEKIYDVW GLTANILHDL ADVAYRGPPE REIGEEELIY AIWKYGNQMK TKKRSEAEVK LIESKTAGDY GFGEILPRVE FNKLKQIYKL
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