| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88597 |
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| Symbol | |
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| ID | 4838097 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1043933 |
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| End bp | 1047681 |
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| Gene Length | 3749 bp |
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| Protein Length | 1183 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389412 |
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| Product | predicted protein |
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| Protein accession | XP_001383826 |
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| Protein GI | 150864842 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.713267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCCTGATCCA TTCTGTTTCC ACCTGAACTA ACCCATTCTC GGCTCTTCTC ACGAAATGGA
CGGCTGGACC GAAATCTCCC GAATAGCGGC CACCACTCAG CCCCCGAAAG GTCCCTCTCC
CCATATCCAT GAGCCAGCAT CCATCACTTC TCTCAAGTTT GACTCGGTGC AGAATCTTAT
ATGGTGCGGT GACAGTTTTG GGTACACAAG ATCATTTACA CCAGGTCCAA ATTCAAATGG
AGTCAATCCC TATCAGCAGA GTTTGCTGTT TCTTCCATAT ACAAAGTTCA AGTCGTCTTT
GAACAACAAT CCCATACTTC AGCATCTAGA CCACAAGGAT GGGATCTTGC TGCTTCTGAG
CAATTGCATC AACTTCAACA ACCGTAGAGG TTTGGCCAAG TTATCTTTGC TGTCAGATTC
GTTTGTTGAC GCAAATTCCG TTCTTTTCAA GAACTTAACT AGTCTCACGA CCAACTGTAA
TACTATGAAC GATATAGTTG TAGGTAGCAA TTTGTCGCTT CTAAAGTTTG ATCTCAATAA
GCCGTCACAC CTCATGTCGT TCAACCACGA CGGCAACATA TCGATAGTGA ACCAGACATC
AAAATTCTTG ACGTTGGGTA AAGCTAATGG AGCTCTAGAA CTTTTTGATC CCGTAAGCAA
CTCCTCTATC AAGTCGTTCC AGGGCCATAC GGGTTTACTT TCAGACTTGG ACGTTCAAGG
CTCCTACATT GCGACATGTG GATATTCCAT TCGTCCGAGA CGTTACAACC ATAACTCCCA
AAACTCCAAT AATGACTACA TGGTAGACCC CCTAGTTAAC ATCTACGATG TGAGAATGAT
GCGTGCTGTG GCCCCAATAC CGTTCCCAGC AGGTGCTTCC TGTGTCCGTT TCCACCCGAA
GTTACCTAAC ATTGTGCTCA TATCATCCAA TAGTGGCCAG CTTCAATTTG TAGACATCTA
TGACCAAACC AATGTGTTCT TGTACCAAGC AGATTTGATG CCTACATCGC AACCGCGCCA
GCCCCTGCAA TTGTCCAAGG CTCCGTTCAT GACGAATCTT GAAATCAGCG AGAATGGTGA
CTTCTTTGCC TTTAGCGATA GCTATGCGAC AATGCACTTG TGGACCTTAA ACAACTCTGG
TTCGACTATA ACTAAAGACT TTGTCAATTT CCCTGCTAGC ATTGAACAAC CGGATGTAAT
CATACCTCCT GCAACTGAGC ATATTGGTGT GGATGATTTG GTTCCTTTAT CCACAATTGG
TATGCCCTAC TACAAGGACT TGTTACTCTC TAACTATGCC TCGGACTTGA GCTTTACCAA
GGAGTTGGCT AAATTGCCTG ACCCAATCGA CCACGATCTA CTCGTAGAAA GTGAATCTCA
TGTCGGTTTT TTCCCATACG ACAAGTCCAA ATACGGTCCA GCCAACACCG CAAAGAAATA
TCAGTCTCTT AAGGAAAGAA GCAACATCCA TTCGACAGTC AACGTACCTA AGTTTATAAG
TGAAAGAAAC AATGCCTTGA CCAAAACCAT GTCCAACAGT TCAGATTTGC ATTTGGATAT
GAATAACGAT TCATCTGAGA ACGTAGCTAG TCTTGCACTT CAGAATTTGA ACAAGGAACA
TCACAATGAA ATCTTTCAGT ACAAGGTGCC TTTATCGTCT TCTTCGGGAA GCTCCACTCA
AACTGCAAAT AGTAGAAAGA AGATCCCCAA TTGCTATTCG AGATTGCAGA TTCAGTACTC
CAAGTTTGGT GTTAAAGATT TCGATTTCAG CTACTACAAC AGGACTGATG GATTGTACTG
CGGGCTTGAA AATGATGCTG ATAATTCTTA TGTGAATCCC TTACTTCAAT TATACAAGTT
TCAGCCAGCT TTCCACAACT TGATGGTTCG AAACTTGACC AACGAATGGT TACCCAATGA
TTTTGAAACA ATTATCACTC AAAAGAATCC GCAAGGATCT TCGATTCTAA ATGAATTGGG
ATATTTGTTC GACATGATGA ACAAGGCAAA GGACAAAAAT GTGAATATGT CCAACTTTTC
ACAGGTGTTT AAAGAGAATA GACTTGCTCA GACAGAGAAC TTGATTAATC TTGACGAAGG
AGCCAAGTTG AATTCTCAGG CTTTGCGTAA TTTGATCATT GGTTTCAACA AATTCTTGAT
TGCTGAAGTA TACAAGGATT TAATGAACCA GGCCAGAGAC TCCTCTATTT CGAGCCTTAT
GACAGTGCTG TACGTGATGG AAGTTAGAGG AACCGGTCCA TCTTGCCCTA TTTACGATAA
GCAGTTTGGA TCGCAGTTGA GTTTAGATTT GCTTACACCT CCCAGTAACG TATTGAACAA
GTTGAGTATA TTACTTAATC CACAGATCAA CACACAGCAG CAAGTGGTAA CACCTACTAC
GACCAGAAGA AATCATAATT TGATAACCTA CTTGGAGTAC ACCATTAACC AGTTCAAGAC
CATACCATGT CAACAACACC AACATCAATA TCCACACACT TTGGAAGTGC GTTCTTCTAT
CACAAAATTG CCTCCTTTAT TATCGTTGAA TGTTAACTTG TCCAACGAGG AATTCAAGTT
GATCAATGGA TTCAAGAAGT GGCTTGTTCC AGAGTTCTAC GCCTTGAACA ACAACAATGA
TGCACCCATT GCTTTCAAGC CGGTTCTCAC ACAATTTGAT CAGGACTCGA CTAGATATGA
GTTATTGGGT TATGTTTGTG AAATCAGTCA GCAATCTGAT TTTTCATTGG GAACACATAA
CTTGGTTTCA TATGTCAAGA TAGATGGAAG GTGGTTCTTG TTCAATGATT TCTTGGTCAT
GCAAATTCCA GAAGAGGAAG TATTCAACCT TTCGTATCCA TGGAAGAAGC CTGTCATTTT
GGTATACCAC GATAGTTCTA TTTCTGGTAT CCCTTTTGAT TTGTTCCAAA TAGAGACGTT
CGCCAATTTG CCGGGATTGA ACGATTCTAT CATATATCGC GATCACTTTG CTGGGTCAAT
TAGGGAGTCC CACAAGAAGG ATTACGAGTT GTTAACTAGA CAGGAAGCAC CAAGTTTGGG
CACTCTTATT GCCATTGACG CCGAATTCGT GAATTTGAGA CCAGAAGAAC TCGAAGTAAG
ATACGACGGC CACAAAAAGT TAATCAAGCC CAAGTTTCTT TCTTTGGCAA GGTTATCAGC
TCTTCGTGGT GATAATGGTG AGAAACAAGG AGTTGCATTT ATCGATGACT ACGTTGTACA
CACTGGTGAA ATCTACGACT ATCTCACAAG CTTCTCAGGT ATCGAACCTG GAGACTTGGA
CCCTATCAAC TCGGAAAAGA ACTTGGTTAC TTTACAGACA GTTTACAGAA AGTTGTGGTT
ACTTTTGAAC TTAGGTGTTG TGTTTGTAGG ACATGGCTTG TACAATGATT TCAGAGGTAT
TAACTTGCAA GTACCGCAAA ATCAGATTAG GGACACAGCC GATTTCTACT ACAAAAGTGA
TTTCAAGAGA CAATTGAGTT TGAAATTCCT TGCCTATGTT CTATTGAAAG AGAAGGTACA
GACCGGTAAT CACGACTCAA TTGAAGATGC CTACACTGCG TTGTTGCTAT ACAAGAAGTA
TATCGAGATC ACAGCTACTG GTGAGTACGA GAGTACTTTG AATTACATCT ACTCGGAAGG
ACAACAGTTG AGGTTCAAAG TGCCTGAATA GAAAATATTA AGTAATGCCT AATAGATTAA
TGACATTTAA TAATATGAAA ATAGTAATT
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| Protein sequence | MDGWTEISRI AATTQPPKGP SPHIHEPASI TSLKFDSVQN LIWCGDSFGY TRSFTPGPNS
NGVNPYQQSL SFLPYTKFKS SLNNNPILQH LDHKDGILSL SSNCINFNNR RGLAKLSLSS
DSFVDANSVL FKNLTSLTTN CNTMNDIVVG SNLSLLKFDL NKPSHLMSFN HDGNISIVNQ
TSKFLTLGKA NGALELFDPV SNSSIKSFQG HTGLLSDLDV QGSYIATCGY SIRPRRYNHN
SQNSNNDYMV DPLVNIYDVR MMRAVAPIPF PAGASCVRFH PKLPNIVLIS SNSGQLQFVD
IYDQTNVFLY QADLMPTSQP RQPSQLSKAP FMTNLEISEN GDFFAFSDSY ATMHLWTLNN
SGSTITKDFV NFPASIEQPD VIIPPATEHI GVDDLVPLST IGMPYYKDLL LSNYASDLSF
TKELAKLPDP IDHDLLVESE SHVGFFPYDK SKYGPANTAK KYQSLKERSN IHSTVNVPKF
ISERNNALTK TMSNTSLALQ NLNKEHHNEI FQYKVPLSRK KIPNCYSRLQ IQYSKFGVKD
FDFSYYNRTD GLYCGLENDA DNSYVNPLLQ LYKFQPAFHN LMVRNLTNEW LPNDFETIIT
QKNPQGSSIL NELGYLFDMM NKAKDKNVNM SNFSQVFKEN RLAQTENLIN LDEGAKLNSQ
ALRNLIIGFN KFLIAEVYKD LMNQARDSSI SSLMTVSYVM EVRGTGPSCP IYDKQFGSQL
SLDLLTPPSN VLNKLSILLN PQINTQQQVV TPTTTRRNHN LITYLEYTIN QFKTIPCQQH
QHQYPHTLEV RSSITKLPPL LSLNVNLSNE EFKLINGFKK WLVPEFYALN NNNDAPIAFK
PVLTQFDQDS TRYELLGYVC EISQQSDFSL GTHNLVSYVK IDGRWFLFND FLVMQIPEEE
VFNLSYPWKK PVILVYHDSS ISGIPFDLFQ IETFANLPGL NDSIIYRDHF AGSIRESHKK
DYELLTRQEA PSLGTLIAID AEFVNLRPEE LEVRYDGHKK LIKPKFLSLA RLSALRGDNG
EKQGVAFIDD YVVHTGEIYD YLTSFSGIEP GDLDPINSEK NLVTLQTVYR KLWLLLNLGV
VFVGHGLYND FRGINLQVPQ NQIRDTADFY YKSDFKRQLS LKFLAYVLLK EKVQTGNHDS
IEDAYTALLL YKKYIEITAT GEYESTLNYI YSEGQQLRFK VPE
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