| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88335 |
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| Symbol | ALO1 |
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| ID | 4838102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1275614 |
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| End bp | 1277347 |
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| Gene Length | 1734 bp |
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| Protein Length | 556 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389417 |
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| Product | D-arabinono-1,4-lactone oxidase (ALO) (L-galactono-gamma-lactone oxidase) |
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| Protein accession | XP_001383872 |
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| Protein GI | 126134695 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR01678] sugar 1,4-lactone oxidases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.766269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0733119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATAAGAATGT CTATTCCAGA GTCACTTCAG CCGTTTGTCA CCAACAAACT CGTCCACAAA
ACGTGGGCCG GTACTTTCTT CTGCAAACCT CAGGCTATTT TCCAGCCTAG AAACTTGGAT
GAAATCAAGG AATTGATCAA CCAGGCTCGT CAGAATGGCA AAACGATTAT GACAGTTGGG
TCGGGCCATT CGCCCAGTGA CTTGACCATG ACTACCGAGT GGTTATGTAA CTTGGATAAG
TTCAACTCTG TTATTAAGCA GGAAGAATTC TATGGCCAGT CTACTTCCAA CCCTGCCGAG
AAGGAAGTCA AGTTTGTCGA CTTGACAGTA GAGGCTGGAT GTAGAATTTT CGAGTTGAAT
GACTACCTCA AGAAGCACAA GTTGGCTATT CAGAACTTGG GTTCCATATC AGATCAATCC
ATTGCTGGGT TGATTTCTAC CGGAACTCAT GGCTCTACGC AATACCACGG TTTGGTTTCT
CAACAGGTTG TCTCGATCTC GTTCTTGAAC GCAGAAGCCA ATTTGATCAC TTGTAACTCG
GTGGAAAACC CAGACTACTT CCGTGCTGCA CTCTTGTCAT TAGGTAAGAT TGGCATTATC
ACTCATGTGA CTTTGAGAAC TTGTCCTTCT TACACCATCA AGTCCAAACA GGAAATCATC
CGTTTTGACA CGCTTTTGAG CAACTGGGAG AATATTTGGC TCGATTCAGA GTTTATACGT
ATCTGGTGGT TCCCTTATTC GGGCAACTGT GTCTGCTGGA GAGCTTCCAA GTCAGATGAT
CCTCTTTCGG ATCCAAGGCC CTCATGGTAC GGAACGAGAT TTGGCCGATT CTTCTACGAG
TCATTGCTCT GGGTATCAGT TCATATCTTG CCACGTTTGA CACCATTCGT AGAGAAATTT
GTCTTTGAGC AGCAGTACGG TAAAGTGGAA ACTTTGGGTA AAGGTGATAT TGCTGTCCAA
CACTCTGTAG ATGGTTTGAA CATGGATTGC TTGTTCAGTC AATTCGTCAA CGAATGGTCT
GCACCACTTG TTAAGGGCCA GGATGTTCTT CTCAAATTAA GAAAGGAAAT CTTGGAAGCC
GCTGAAAAAG GCGATTTCTT TGTTCATGCT CCTATTGAAG TTAGATGCTC CAACGTGACC
AACTCAAACT CTCCGTTCAT TGATGAAGAA ACTTTCGAGC CGTCTTTGTA TCCTCCAAAG
TCTTGGTTGG CCAAGAGAGA CAGGTTGAGT GCGGGCCCAA TTCCTGGTAA CAACTTTCGT
CCATTCCTCG ACAACTCTCC ATATATTCCT TTTGCTGGCG AAGGAGCCAC TGTGACAAAC
GACCAGTTGA CCATGTTCGT CAACGCTACC ATGTACAGAC CCTTCGGTAC CAATGTCGAA
ACTCACCAAT GGTTCCAAAT CTTTGAAAAC ATCATGGGAG ATGCAGGCGG AAAGCCTCAT
TGGGCTAAGA ACTTCATTGG TATCGATGGC GACCAAAAGA CCGAACAAGA CTTGAAGACA
CAGCTAGACT TTGGTGGAAA GCCATTCTAC ACGATGATTG GTTTCAACCC TGTGATGAAG
GACTGGTTCG GGGAAAACTT GGTAAAGTAC AACCAAGTCA GAAGGGAGAC CGACCCTAGC
GGTGTATTCC TCAGTGGCAA GAGCTGGGCC ATTAGAAATG GTATACTTTT AGACTAAAAT
AGATTTTACT GGTATAGAAA ACAAGGAATA GATATCAATA TACGTTAATT TACG
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| Protein sequence | MSIPESLQPF VTNKLVHKTW AGTFFCKPQA IFQPRNLDEI KELINQARQN GKTIMTVGSG
HSPSDLTMTT EWLCNLDKFN SVIKQEEFYG QSTSNPAEKE VKFVDLTVEA GCRIFELNDY
LKKHKLAIQN LGSISDQSIA GLISTGTHGS TQYHGLVSQQ VVSISFLNAE ANLITCNSVE
NPDYFRAALL SLGKIGIITH VTLRTCPSYT IKSKQEIIRF DTLLSNWENI WLDSEFIRIW
WFPYSGNCVC WRASKSDDPL SDPRPSWYGT RFGRFFYESL LWVSVHILPR LTPFVEKFVF
EQQYGKVETL GKGDIAVQHS VDGLNMDCLF SQFVNEWSAP LVKGQDVLLK LRKEILEAAE
KGDFFVHAPI EVRCSNVTNS NSPFIDEETF EPSLYPPKSW LAKRDRLSAG PIPGNNFRPF
LDNSPYIPFA GEGATVTNDQ LTMFVNATMY RPFGTNVETH QWFQIFENIM GDAGGKPHWA
KNFIGIDGDQ KTEQDLKTQL DFGGKPFYTM IGFNPVMKDW FGENLVKYNQ VRRETDPSGV
FLSGKSWAIR NGILLD
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