| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88209 |
|---|
| Symbol | FST1 |
|---|
| ID | 4838339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | - |
|---|
| Start bp | 359001 |
|---|
| End bp | 362941 |
|---|
| Gene Length | 3941 bp |
|---|
| Protein Length | 1028 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640389654 |
|---|
| Product | Fungal specific transcription factor |
|---|
| Protein accession | XP_001383698 |
|---|
| Protein GI | 150864738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0520649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TATTTAGACT CTTTTTTCGA ACCATACAAT TTTTCAATTT ATTCACTATT TGAAAACTAT
TGACTTCTAC TGAACATAGC CAACATGGTA GACGACGCCC AGGCCCGCAA ACGAAACCGG
TTGTCGCTCA GCTGCAATTA CTGCAAAAAG AGGAAAGTCA AGTGTGATCG TGGTAGACCT
TGTTCTTCTT GTGTGCGGTA CAATGTAGCC AATCTCTGTG AATACTCGGA CCCTATATGG
CTGGAGCCGG TGGCCATAAC CGGTAATGCC GCCATGGCGG CCACCTCCAA TCAAAACTCA
CGAAAATCCC CTCAATCACA TAGCCTTTCT GCTTTCCACG TCAACGGTAG CAGCAATAGT
CCGCATACGT CATCTCATTC TCACAGCTCG AACTTGCCGT CTTTTTCTGT GCAACGTTTC
CATCCACCAG CAGCTTCTAC CAAACCGCCA CAGGCAAATG GAGGTGTTCA AACCTCTTTC
CACGTGCCGC CACCTGGCCC TTCGAATCAC TCCGGAAACC ATTCTTCACG AGGTACAGCT
AGCCACCAAG ATCCCTCTCT GGCAGCTCCG GCTGTGCAAT CTGAGTTGGA AACGCTCAAA
AACAAAATCA AGGAAATCGA GGCCTCGCTC AAGCCACAGT CATCGCAACA TAATCACAAT
CAACATAATC ACAATCTTGT GGATCATAGT CACAATTCAC GAAGTGTTCA TACTTCAACA
AACTCATTCT CATCTCAGCC ATCTCTATCT ACAGCAAACG GTAATGTCCA TAACAGAACT
TCTCCAGAAG GCTCACTTTC TTCGGCTTCT TCTAATTCAT CGGCCAATGC TATACCATAT
TCGTACTTAT CTGGTTCTAG ACCTACCGGT GGAAATGGGA ATCTTCCAAT TCAGCTTCCA
CCTCTTCAGT GGACTCATAA TGCAGACCGT CCAGATGTAG ACTATACCGG AAGACCTCAA
TATGTCAACA GATACGTTTT AAAGTTTGAG GACTTCAAGT ATAATCCAGA CAAAAACCCT
ACGTTCATTG GGATAAATCC CTTTTCTGCT GATGACGACT TGATCAATTT ATACGAAGGC
TATACACCTA TTCATATCCG AGACGCCTCC AGACGAATGA ATTACGGTCC ATTTGCTTGG
CTTTCGATAA TGAAAAAGGA TCCTGGTCTT TTGTCTCTCT GGAAATTCAT GATGTCTAAA
AAGCATGAAA GACATCTTGC CATTCAGAGA TTGGCAAGAA CCGCACCAGC TCCGGAATTG
GGACTATTAC CCGAAAAGGA ACCAGAGCAG ACTTCAGCTC CTGCCGATTC TCCCAAAGGT
GCCGACGACC AAGAAAAGAT CTTCCGAGAA AAGGCTATAG ACAGGGATGG TTTCAATGAC
TTGAGATTGT ACGGAAATGT GGCTAAGGCG AGTGACACCA GTGGTAACCT GAAGGAGAAG
ATCCACTCTG GAGGATACTC AAAGGTTGAA TTACATAATC CAAAGGCTCA CCAAAAAACC
CAAATGAACA AACTGGGTAT AGCGCTTGGT CTAACTATGT ATGAGGGACA GATTGGCAGA
GAGTTAGAGT TGATTGAGAA AATTAAAATG ATCTTACCCA AACAAAAAGT GATCTGGAAG
TTGATCAACA AGTTCTTCAA GAGTGTCTAT CCTTACATGC CATTCATAGA TGAGAACTAT
TTCAAGTTGG AGATGGCTAG AATCCTTGGT CCAGAAGCTT ACTCTGATAG TCGCTTGGGA
GACTTGAAGA TCGAGAAGAG ATTAGACTTG GCTCAGATTG GAATATTGTT GATCATCCTC
AGAATCTCCT ATTTGTCTCT TTTCTCCAAC AGAAGAGCTG TAAACCAAAA TAACTTGAAT
TCTAACGATC CAGCCCCACC TGCTATTGAG ATGAAGTATC TATTGTCTAA TCCAATCAAT
ATAGATGTCA TAGACGTAGC CCAGTTGTGT CTTGACCAAT TCGAATTGTT GCGTAAATCC
AGTTTGGTTA TCTTGCAATG TGCCTATTTC ATGAGGTTGT ATCATATGTT TTCTCCTGAA
GATGGTGATG GAGCCGACGG TGGAGACTCA CAGATATTTA ATGGAATGTT AGTACAAATG
GCTTATTCCA TGGGTATCAA CAGAGAACCG GATACCTTTC CAGATATCTG TAATGACGAG
AAGGTTAACA ATCTTGGTAG AAAGATTTGG TTCTTTTTGA TTATCAACGA TTTGATCCAG
GCTTACCAAT ACGGCAACCC CTTGACTATC AGAGAGAAAT ACTACGATAC CAAGTTACCA
TACTATAAAA AGGGTAACGA AAATATTTCA GATGTGTCTA TGGAACAGCA TGTCATCAGT
ACATTTGCCT ATTTTGAAAA GTACTACTAT AGGTTGACAG CTATTCTTGA TATCTGCTTG
GATATCAGGA AGAAGGTGAA GGTTTCACAA TTGTCAAACT TGATGGGTGA CTTTGAACAT
CATTTAAATG ATCATTATGG AACATTGCGA TACTTCTTGG TGCCATTCCA ACAGGACAAT
TACGTTTACC CTTTCCTCAA GACAATGAAG TGTAAGAACT ATATCAACAT GAAAGGCTTT
TTACTCACCA TATATTTCCA CATGTACCTT TATTACGAAA GTAAGAAGAA GACCGACTTT
GCCTACTTCT ATGTCAAAAA GATATTTGCG ACAACGTGTG GTGAGTTTGT TCCTTCTTTC
TTCCCTTTGA TCACGAACAA CTATATCAAC TTTGGTGAAA CGGCAGACTT GATCTTGAAC
CCCACCATTG AGAGTATGAT TCACAAGACT ACGCAGATGA ACTTTGCGAT TTTGGTGAGA
CTAAATTCGA CCATTTATCG TATGAAGCAC AATGCAAATC ATGGCTTAAA TTTGAGAGAC
AACTTTGGCT ACAAGTTGAA ATTTGCCAAA TTATGTAAGC TTTCTAAAAT TTTGGAGAAG
ATTATCAAGT TCTGTATAGC TGCGATGTCC AGATTGAGTC AGCGTTACTA CTATGCCTGG
CGTGTTACCA AGGCACATAC TTTCTTGTTG AAGATGATTA TTGGTGAAGA ATTCTACAAG
TATTGCCAGG ATGATGAGCA GATAATCTTC TTAGACTTGA GCAATGATCA GCTCAATGAA
TTGACAGAAA TTTGTGAAGT CACATTGAAG AAGTTCGGCA AGACTAAGAT CTTCCATGCA
GCAAGTGAAT TGTTTGACGA TATCAACAAT GAAGATATTG AAGCTCCAGT TCTTGATGGA
GCCAACTCTC GTGTCAGTGT TTCTTCTACC CCACAAGCTG CTTTTGATGG TACTAATGGT
TCAGAACCAA ATGCAGCCCA TATGGCTGGA GTCATAAATG TTCCATCATC AGTTGATTCC
ATAGGCAGTG CAGATATGGA TGATTTCCAA TTTATTGAAA ATGTTGAAAT CGATAAATTG
TGGTACCAAA TGGCTTCCAT CAAGAACGAA AACAATAACA ACTCCAACAG CAATACCAAT
ACCAACAACA ATAGCACTGG CAAGGCTACG GGATCAGCAG GGTTGTTCAA CTTTGGCCTC
AACGTTGTTT CTGGAAGCTC TGCGCAGGAC GATGGGCCCT TCAAGTTACC TGGACAGAAA
GCCAGTGTTG TTGATCCTAA CCCTGCTGAA GGCGGTTCTA CTGGTTATAC CCCTATGAAC
TTGTCTATTC CGACTCCTTT GATGAATCCC TTGAGTCCAG AGAGTTTGAA CACAAATTCA
GGAGGGCAGC CATCTAACGC TGCTGCTGAA GAGGAGTTGA CAACGGCAGA TTTTTACTCC
ATCGATATTT TCAACAATTT ACCTATTGAC CAGTTACTTG GTTTCCGTGA CGAAGTAGAT
GAAAGTTGGT AGAAATAAGT ACCATAGACA TAAGATTAAG AAGAGTATCA ATATCTGTAT
ATTACTGTAT CTATGTAATT AGAAAAGGAT GTTCTTCCTT G
|
|---|
| Protein sequence | MVDDAQARKR NRLSLSCNYC KKRKVKCDRG RPCSSCVRYN VANLCEYSDP IWSEPVAITA
SHQDPSSAAP AVQSELETLK NKIKEIEASL KPQSSQHNHN QHNHNLFEDF KYNPDKNPTF
IGINPFSADD DLINLYEGYT PIHIRDASRR MNYGPFAWLS IMKKDPGLLS LWKFMMSKKH
ERHLAIQRLA RTAPAPELGL LPEKEPEQTS APADSPKGAD DQEKIFREKA IDRDGFNDLR
LYGNVAKARY SKVELHNPKA HQKTQMNKSG IALGLTMYEG QIGRELELIE KIKMILPKQK
VIWKLINKFF KSVYPYMPFI DENYFKLEMA RILGPEAYSD SRLGDLKIEK RLDLAQIGIL
LIILRISYLS LFSNRRAVNQ NNLNSNDPAP PAIEMKYLLS NPINIDVIDV AQLCLDQFEL
LRKSSLVILQ CAYFMRLYHM FSPEDGDGAD GGDSQIFNGM LVQMAYSMGI NREPDTFPDI
CNDEKVNNLG RKIWFFLIIN DLIQAYQYGN PLTIREKYYD TKLPYYKKGN ENISDVSMEQ
HVISTFAYFE KYYYRLTAIL DICLDIRKKV KVSQLSNLMG DFEHHLNDHY GTLRYFLVPF
QQDNYVYPFL KTMKCKNYIN MKGFLLTIYF HMYLYYESKK KTDFAYFYVK KIFATTCGEF
VPSFFPLITN NYINFGETAD LILNPTIESM IHKTTQMNFA ILVRLNSTIY RMKHNANHGL
NLRDNFGYKL KFAKLCKLSK ILEKIIKFCI AAMSRLSQRY YYAWRVTKAH TFLLKMIIGE
EFYKYCQDDE QIIFLDLSND QLNELTEICE VTLKKFGKTK IFHAATNSRV SVSSTPQAAF
DGTNGSEPNA AHMAGVINVP SSVDSIGSAD MDDFQFIENV EIDKLWYQMA SIKNENNNNS
NSNTNTNNNS TGKATGSAGL FNFGLNVVSG SSAQDDGPFK LPGQKASVVD PNPAEGGSTG
YTPMNLSIPT PLMNPLSPES LNTNSGGQPS NAAAEEELTT ADFYSIDIFN NLPIDQLLGF
RDEVDESW
|
|---|
| |