Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_88185 |
Symbol | |
ID | 4838149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1332087 |
End bp | 1332791 |
Gene Length | 705 bp |
Protein Length | 155 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389464 |
Product | predicted protein |
Protein accession | XP_001383546 |
Protein GI | 126134043 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2075] Ribosomal protein L24E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0390204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.523172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGTTAATAAA AATGAAGGTT GAAGTTGACT CCTTTTCCGG TTCCAAGATC TACCCAGGTA GAGGTACCTT GTTCGTTAGA GGTGACTCTA AGGTTTTCAG ATTTCAATCC TCGAAGTCTG CTTCCTTGTT CCACCAAAGA AAGAACCCAA GAAGAATCTC TTGGACTGTT TTGTACAGAA GACAACACAA GAAGGGTATT TCTGAAGAAA CTTCTAAGAG AAGAAGCAGA AAGACCATCA AGCACCAAAG AGCCATTGTC GGTGCTTCTT TAGAATTGAT CAAGGAAAGA AGAAACTTAA AGGACTCTGA CAGAAAGGCT GCCAGAGACA ACAAGTTGGC CAAGGACAAG GAAGCCAAGA AGGTTGCCAA GGCTGCCAGA AAGGCTGAAA AGGCCAAGTT GGCTGCTGCC GGCGGTAACA TCGTCTCCAA GCAACAATCC AAGGGTGCTT TCCAAAAAGT TCACGCCACT TCCCGTTAAG TAAATTAAAC GAATAATTTA TCTTCACTCC GTGTACATTT ATTAATTGGT TTGGTAGCTT TTGTTATATA TCAATATAAA CTCTTCTAAG AATGCGATGT ATTAATGTAA CTACTCGGTA TTATCATGAA CTGACAATGT CTGCTTCATG GGTCGCCCGT ACTACTAATA TCAATTGTAT TGTACATGCT TTGGCAAACT GTATTGAGAA TACTACGAAA TAATT
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Protein sequence | MKVEVDSFSG SKIYPGRGTL FVRGDSKVFR FQSSKSASLF HQRKNPRRIS WTVLYRRQHK KGISEETSKR RSRKTIKHQR AIVGASLELI KERRNLKDSD RKAARDNKLA KDKEAKKVAK AARKAEKAKL AAAGGNIVSK QQSKGAFQKV HATSR
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