| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83008 |
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| Symbol | DAP1 |
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| ID | 4837707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 28911 |
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| End bp | 29893 |
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| Gene Length | 983 bp |
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| Protein Length | 317 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389022 |
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| Product | Dihydrodipicolinate synthase |
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| Protein accession | XP_001383646 |
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| Protein GI | 150864707 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATTC TTCCTGCTTC CGTACTCCCT GAGGGAATTT ACACTCCAAT TACTACCTTC
TTCAAAAATG ATGCTGATTA CACTTTGGAC CTTGAATCCC AAGTTGAACA TGCAAAGTTC
TTGTATGATC GAGGAATATC TGGTCTCGTT GTTGCTGGTT CAATGGGGGA AACTCCACAC
CTCAGTAGAC AAGAAAGACT GGCCCTCGTT TCTAGTTTAA GAATGGCTAT TCCAGATGAA
AATTTTAAAA TTATTGCAGG CGCACCTCCA ATTGGTAATA TTGAAGAAGC AATTGAAGAA
ATCGATTCTG CAAGAGATGC GGGAGCCGAT TTCATGATCC TTCTTGTTCC TGGTTATTTT
GGTCCCAAAT TGATTAGCCA AGAAGGAATC GTTGATTATT TTCTTAAAGT TGCTGATAAG
TCCTCCTTAC CAATTGTGAT TTACAATTAT CCTGGGACTT CAAACAATGT CACAATTACT
CTCGACAGTT TCAAGAAGCT CTCAGTCCAC GAGAAAATAG TTGCAGTCAA GTTGACTCAT
TTCAATTTGG ATTTGTATAC CATGTTAGGT AGGGATTCAG AACTTTGTCA AACTAATAAT
TTCAGACCTT TTACAGGACT TGGTCAAGTA TTGATTCCAG CATTATCAGT GGGAATTTAC
GGAGCTATTG ATGGAATGTC AGCCTTATTC CCCAAGGTTA TGGTAAAGCT TTTAACTCTA
TTCAAAGAGG GAAAGTTAAA GGAATCAAGC GAACTTCAAT ATTTGGTTAC TAAGGCTGAC
ATGATGATTA TGGAATTGAA TGTCGTTGGT GTCAAACATG CACTCAAACA GTTCTATGGC
TTTGGAGAAA GCTTAACAGG AAGGCCACCG CTCAGCAAGG AAGTCGACTT GAACGCTTAC
TCAAAGTACC AAGCTGACTT GAATACTCTT GATAAGATAG AAAAGTCCCT CTAGATGTTT
AATATAAATA CCATTTCTTC TCG
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| Protein sequence | MTILPASVLP EGIYTPITTF FKNDADYTLD LESQVEHAKF LYDRGISGLV VAGSMGETPH
LSRQERSALV SSLRMAIPDE NFKIIAGAPP IGNIEEAIEE IDSARDAGAD FMILLVPGYF
GPKLISQEGI VDYFLKVADK SSLPIVIYNY PGTSNNVTIT LDSFKKLSVH EKIVAVKLTH
FNLDLYTMLG RDSELCQTNN FRPFTGLGQV LIPALSVGIY GAIDGMSALF PKVMVKLLTL
FKEGKLKESS ELQYLVTKAD MMIMELNVVG VKHALKQFYG FGESLTGRPP LSKEVDLNAY
SKYQADLNTL DKIEKSL
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