Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_82622 |
Symbol | DFR1 |
ID | 4837710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1762235 |
End bp | 1763043 |
Gene Length | 809 bp |
Protein Length | 203 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389025 |
Product | dihydrofolate reductase |
Protein accession | XP_001383622 |
Protein GI | 150864687 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.778067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATAGAAAATC CTGTAAAAGT AGTATCAGAT TTTCACTCAT ACAAATAATT TTCGTTTGCA TGTCTGAGAT CAAACCTACT ATAGCCATCA TAGTGGCTGC CCTAAAGCCA GATCTTGCCA TAGGGTTCCA AGGTAAAATG CCCTGGAGGT TACGGAAAGA GATCCGCTAC TTCAAGGACG TCACCACCAA GACCTCAGAT CCATCTAAGA TCAATGCTGT GGTGATGGGA CGAAAGACGT GGGATTCGAT TCCAGCTAGA TTCAGACCTT TACCAGATAG AATCAATATT GTCCTCTCGC GATCGTTCCA GAACGAGACT GTTGACACCA ACGTGATACA CGCCAACTCC ATAGCAAACT CACTTAGTCA GTTGCAGCCA AATGTCGAGA GAGTCTTCGT TATCGGTGGA GCGGAAATCT ACAATGAATT GATTAACGAT TCGAGAGTGA CCCATTTACT ACTCACAGAA ATCGAAAATA CCAATGAGGA CAACCAAATC GCCGTAGATA CCTTCTTGAA GTTTCCGTTG TATAGTACAG ATTCACAATG GAGAAAGCAA CCGAAGCTGG AATTACAAAA GTTTATAGGC TCGTCCATCA CCTTAGAAGA TGACATTTCC GAAGGCGACC TTAAATATAA TTACACATTA TGGACAAGAA GGGCTGGATA ATGGTAATGG CTATCTTTCA TAATGTCTTG TCGTCGTATT TAAGAATGTC TATACACTTC ATCCAAGTAT CGAATTACAG AATAATTATG TTACTATGTA CATTACTATT AGAAAAGGTT TATAAACATC GTTACTTGC
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Protein sequence | MSEIKPTIAI IVAALKPDLA IGFQGKMPWR LRKEIRYFKD VTTKTSDPSK INAVVMGRKT WDSIPARFRP LPDRINIVLS RSFQNETVDT NVIHANSIAN SLSQLQPNVE RVFVIGGAEI YNELINDSRV THLLLTEIEN TNEDNQIAVD TFLKFPLYST DSQWRKQPKS ELQKFIGSSI TLEDDISEGD LKYNYTLWTR RAG
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