Gene PICST_82622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_82622 
SymbolDFR1 
ID4837710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1762235 
End bp1763043 
Gene Length809 bp 
Protein Length203 aa 
Translation table12 
GC content40% 
IMG OID640389025 
Productdihydrofolate reductase 
Protein accessionXP_001383622 
Protein GI150864687 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.778067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGAAAATC CTGTAAAAGT AGTATCAGAT TTTCACTCAT ACAAATAATT TTCGTTTGCA 
TGTCTGAGAT CAAACCTACT ATAGCCATCA TAGTGGCTGC CCTAAAGCCA GATCTTGCCA
TAGGGTTCCA AGGTAAAATG CCCTGGAGGT TACGGAAAGA GATCCGCTAC TTCAAGGACG
TCACCACCAA GACCTCAGAT CCATCTAAGA TCAATGCTGT GGTGATGGGA CGAAAGACGT
GGGATTCGAT TCCAGCTAGA TTCAGACCTT TACCAGATAG AATCAATATT GTCCTCTCGC
GATCGTTCCA GAACGAGACT GTTGACACCA ACGTGATACA CGCCAACTCC ATAGCAAACT
CACTTAGTCA GTTGCAGCCA AATGTCGAGA GAGTCTTCGT TATCGGTGGA GCGGAAATCT
ACAATGAATT GATTAACGAT TCGAGAGTGA CCCATTTACT ACTCACAGAA ATCGAAAATA
CCAATGAGGA CAACCAAATC GCCGTAGATA CCTTCTTGAA GTTTCCGTTG TATAGTACAG
ATTCACAATG GAGAAAGCAA CCGAAGCTGG AATTACAAAA GTTTATAGGC TCGTCCATCA
CCTTAGAAGA TGACATTTCC GAAGGCGACC TTAAATATAA TTACACATTA TGGACAAGAA
GGGCTGGATA ATGGTAATGG CTATCTTTCA TAATGTCTTG TCGTCGTATT TAAGAATGTC
TATACACTTC ATCCAAGTAT CGAATTACAG AATAATTATG TTACTATGTA CATTACTATT
AGAAAAGGTT TATAAACATC GTTACTTGC
 
Protein sequence
MSEIKPTIAI IVAALKPDLA IGFQGKMPWR LRKEIRYFKD VTTKTSDPSK INAVVMGRKT 
WDSIPARFRP LPDRINIVLS RSFQNETVDT NVIHANSIAN SLSQLQPNVE RVFVIGGAEI
YNELINDSRV THLLLTEIEN TNEDNQIAVD TFLKFPLYST DSQWRKQPKS ELQKFIGSSI
TLEDDISEGD LKYNYTLWTR RAG