Gene PICST_77120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77120 
SymbolRPS26A 
ID4837782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp870350 
End bp870820 
Gene Length471 bp 
Protein Length119 aa 
Translation table12 
GC content41% 
IMG OID640389097 
Product40S small subunit ribosomal protein S26A 
Protein accessionXP_001383448 
Protein GI126133847 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4830] Ribosomal protein S26 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0450387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAACATGCCA AAAAAGAGAG CTTCCAACGG TAGAAACAAG AAGGGTAGAG GTCACGTCAA 
GCCAGTCAGA TGTTTGAACT GTGCCAGATG TGTTCCAAAG GACAAGGCCA TCAAGAGAGT
CACCATCAGA AACATGGTTG AAGCCGCTGC CGTAAGAGAC TTGTCTGAAG CTTCTGTCTA
CCAAGAATAC GCTTTGCCAA AGTTGTACAA CAAGTTGCAC TACTGTGTCT CCTGTGCTAT
CCACGCCAGA ATTGTCAGAG TCAGATCCAG AACTGACAGA AGAATCAGAA CTCCTCCACA
AAGAAAGAGA TTCAACACTG ACAGAAAAGT TTCTCCACAA GATGCTGCTA AGAAGGCTAA
CTAAATTTGA CCCAGAATTA TAGTTTCATT TATTGTAATT TAATTAATTG TATATTGAGT
TGAATGGTTT AGTTTAGGCA TTTGTTATGA ACCTACATAA ACACCACGTA T
 
Protein sequence
MPKKRASNGR NKKGRGHVKP VRCLNCARCV PKDKAIKRVT IRNMVEAAAV RDLSEASVYQ 
EYALPKLYNK LHYCVSCAIH ARIVRVRSRT DRRIRTPPQR KRFNTDRKVS PQDAAKKAN