Gene PICST_71538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_71538 
SymbolCYB5 
ID4838032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1492556 
End bp1493191 
Gene Length636 bp 
Protein Length124 aa 
Translation table12 
GC content43% 
IMG OID640389347 
Productcytochrome b5 
Protein accessionXP_001383573 
Protein GI126134097 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG5274] Cytochrome b involved in lipid metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.124816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGAAGACCCC TTGTATTCTT ACTCTAGACA TATACCTAGA TTTAGAGTCA ACACTGGAAC 
ATATTCGAAT ATATATCGTG TTTGTTGCCT CGTTTATTTA TCCTACTTAT TTATTCATTT
CCAACTACAA CTATGGCTAC TGAAACCTTG AAGACCTACA CTTACGAAGA AGTGTCCAAG
CATAAGTCCC ACGACGACTT GTGGGTTGTC TACAACGGTC AAGTCTACAA CATCTCCCCA
TACATAGATG AACACCCTGG TGGTGAAGAA GTTGTCCTTG ATGTCGCTGG TACTGATGCC
ACCGAAGCCT TCAACGACAT CGGTCACTCT GACGATGCCC ACGAAATCTT GGCTGGCTTG
TTGGTTGGTA AGATCGAAGG CGGTGTCACC AAGGAAGTCA AGTCCATTAT CAACACCGAA
CAAGAAGGTG GTTTTGGGTT CCCAGTCATC GCTGTCGCTG TTTTCTTGAT TGCATTCGCT
GCCTACTACT TCTTGCAAAA CAACTAACCT CCAAATTCTA ACCTTTGGAC AGGTTCAGGC
TGGTAAAGCT ATAAATTGCC ATTCATTTAA AGCTCCACCG TTTGTTATCT AGTTTATAGT
TCTGCTCTGG AATTCCAGAA ATAAACGTTT CACTAT
 
Protein sequence
MATETLKTYT YEEVSKHKSH DDLWVVYNGQ VYNISPYIDE HPGGEEVVLD VAGTDATEAF 
NDIGHSDDAH EILAGLLVGK IEGGVTKEVK SIINTEQEGG FGFPVIAVAV FLIAFAAYYF
LQNN