Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_71538 |
Symbol | CYB5 |
ID | 4838032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1492556 |
End bp | 1493191 |
Gene Length | 636 bp |
Protein Length | 124 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389347 |
Product | cytochrome b5 |
Protein accession | XP_001383573 |
Protein GI | 126134097 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG5274] Cytochrome b involved in lipid metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.124816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | AGAAGACCCC TTGTATTCTT ACTCTAGACA TATACCTAGA TTTAGAGTCA ACACTGGAAC ATATTCGAAT ATATATCGTG TTTGTTGCCT CGTTTATTTA TCCTACTTAT TTATTCATTT CCAACTACAA CTATGGCTAC TGAAACCTTG AAGACCTACA CTTACGAAGA AGTGTCCAAG CATAAGTCCC ACGACGACTT GTGGGTTGTC TACAACGGTC AAGTCTACAA CATCTCCCCA TACATAGATG AACACCCTGG TGGTGAAGAA GTTGTCCTTG ATGTCGCTGG TACTGATGCC ACCGAAGCCT TCAACGACAT CGGTCACTCT GACGATGCCC ACGAAATCTT GGCTGGCTTG TTGGTTGGTA AGATCGAAGG CGGTGTCACC AAGGAAGTCA AGTCCATTAT CAACACCGAA CAAGAAGGTG GTTTTGGGTT CCCAGTCATC GCTGTCGCTG TTTTCTTGAT TGCATTCGCT GCCTACTACT TCTTGCAAAA CAACTAACCT CCAAATTCTA ACCTTTGGAC AGGTTCAGGC TGGTAAAGCT ATAAATTGCC ATTCATTTAA AGCTCCACCG TTTGTTATCT AGTTTATAGT TCTGCTCTGG AATTCCAGAA ATAAACGTTT CACTAT
|
Protein sequence | MATETLKTYT YEEVSKHKSH DDLWVVYNGQ VYNISPYIDE HPGGEEVVLD VAGTDATEAF NDIGHSDDAH EILAGLLVGK IEGGVTKEVK SIINTEQEGG FGFPVIAVAV FLIAFAAYYF LQNN
|
| |