Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67215 |
Symbol | |
ID | 4837815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 217261 |
End bp | 218427 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389130 |
Product | predicted protein |
Protein accession | XP_001383671 |
Protein GI | 150864722 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.546499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACA CCCTCGAGAA GAAAGTCGCT AATGCCCACT TTCCCAGAGC ACCTGGTAGT ACTCTTGTTT CTTCTGAGAG ATTAAATGTA GTCTACAACA AGTACAAATC TACCACTACA ATCCCAGCAG ATGCCATTCG TTTCAATTTC GTCTTTGCTC ATGGTACAGG AATGAACAAG GCCATTTGGC ACTTCCACAT CACTCAGTTG TTTGAATGGC AGGCGAAAAG CAATGGCAAG ATCTACATCG ACACAATTGT GTCAGTCGAC GCAGTTGGCC ATGGTGATTC TGGTGTTCTC AACGATGGTA AACTTGGCTG GATTTCCAGA TGGGACGAAG GAGCAAGGGA CTTGCTTGAA GTAATCAGAC AAGAACAAGC CTCCACAGGA GACTTGACCA ACGATCTCAA GTCGAGAAAT ATTCTTGTGG GCCATTCTAT GGGTGGTTTC CTGTCTCTTT TTGCTGGCTT CCACGAACCA AACTTGGTTG ACTCTATCGT TGCTGTGGAA CCTGTGTTGT ACGCTAATGC AAAGGAAATA GGTAAGTTTG CCAAAAGATT CGCCATGATT GGCCTGATGC TTGTGGACGA GTTTGCAAGT TACAAGGATT ATGAGGATTT TTTCAAGGTA TACTCCTTCT ACAAGAATAT TGATCCAAGA GTTATGGAGG ACTTTATCCA GGACGAGTTG CTTGTTGTAG CGGACCCCGT TTCTGACAAG AAGTCGTTCA AGACAAAGAC ATCCAAGGCT GCTCAAATAG CAGCTTACAC ATCAGGAATG CCGTCGCTTA TCGCAGGTAT GGACGAATAC CAACATATTA ACGTTCCAAT CACCCATGTA GCTGGCAAGA CTGCCAAGTG GAATGCTCGT GAAACAAATC CATTTTTCAG AGGTGCCATT AAGCCAGAAT ATTTGGTTGG CGTCTATGAC GTTGAAGGTG GTGAGCACTT ACTCCATGCC GAACAGCCTG ACGTAATGGT TAAAATACTA CAAGAACATA CTACAAAGAG ACAAGTAGAC TACCTGAAGC ACCTCCAAGA AGTACCAGAA TTCAAGTTCA AAGGCTCCAA AGAAAAGATA CTGGAAGCTG AAGTTGAAGG AAAATTGCTT CAGGGACGTT TCCTTGAATT GCACGGTTAC GGTTACAAGC TCCCACCCAA GTTGTAG
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Protein sequence | MSYTLEKKVA NAHFPRAPGS TLVSSERLNV VYNKYKSTTT IPADAIRFNF VFAHGTGMNK AIWHFHITQL FEWQAKSNGK IYIDTIVSVD AVGHGDSGVL NDGKLGWISR WDEGARDLLE VIRQEQASTG DLTNDLKSRN ILVGHSMGGF SSLFAGFHEP NLVDSIVAVE PVLYANAKEI GKFAKRFAMI GSMLVDEFAS YKDYEDFFKV YSFYKNIDPR VMEDFIQDEL LVVADPVSDK KSFKTKTSKA AQIAAYTSGM PSLIAGMDEY QHINVPITHV AGKTAKWNAR ETNPFFRGAI KPEYLVGVYD VEGGEHLLHA EQPDVMVKIL QEHTTKRQVD YSKHLQEVPE FKFKGSKEKI SEAEVEGKLL QGRFLELHGY GYKLPPKL
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