| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57832 |
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| Symbol | |
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| ID | 4838037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1516067 |
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| End bp | 1517014 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 12 |
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| GC content | 36% |
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| IMG OID | 640389352 |
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| Product | predicted protein |
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| Protein accession | XP_001383908 |
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| Protein GI | 150864903 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.746726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.378562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCA ATAATAGCTT TGTTATTCCA AAGGGTATTT TCACCCCAAT CCCAACTTAC
TTTAAGGATG ATGGCTCGTA TTCCTTGGAT TTAGAAACAC AAGTCAAACA TGCCAAAATG
TTGTACGAAT CTGGTATCAA CGGACTTGTT GTTTCTGGAT CAATGGGAGA AGCTTCTAAT
ATGACAATGA AAGAAAGATG TTCTGTTTTA AAGGCAATCA GAGAAGCAAT TCCAGACTCA
AACTTTAAAC TTATAGCTGG AATGCCTCCA TCCAACTACC TGGACATCAT TGAAGAGTCA
CAAATTGCAA GTGATTTAGG GGCCAACTTT ATTATTGTGT TGGTTCCAGG TTATTTTGGA
ACTAAGTTAG TCACTCAACA AGGAATTATT GATTATTTCA AAATTGTTGC CGACGGAAGC
AGTTTGCCAA TAATGATCTA TAACTATCCA GGTGTGGTCA ATGGGGTTGA TATTGAAGTT
AGCACTTTTG AGGAGCTTGC AAAGCACCCA TTTATTGTTG GTGTGAAATT GACTCACTTC
AATTTAGATA CATATACATT ATTGGGTAAA AATCCAATAT TACTGGCAAA CAACTTTACT
CCATTCACTG GCTTAGGACA GGTTCTTGTT CCAGCCCTTT CGGTTAATAT CAAAGGTGCG
ATTGACGGAT TATCTGGAAT CTTTCCAAAA ACCATGTTGA AGCTTTTGAA ATTGTATGAG
AGCGGTAAAT TTGAACAAGC AGCCGATTTA CAATATCTTG TTACAAGAGC AAACATGATG
ATTGGTGAAT TCAATGTCTA TGGAGTTAAG TATACCCTCA AACAAATTTA CGATTTGGGA
GATTGTATCA CTGGAAGACC TCCACTTAGT ACCAATATTG ATACTGAGAA ATATAAGAAA
TATCAAAACG ATATTGACTT ATTACTTAAA TACGAAAACT CTTTATAA
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| Protein sequence | MTFNNSFVIP KGIFTPIPTY FKDDGSYSLD LETQVKHAKM LYESGINGLV VSGSMGEASN
MTMKERCSVL KAIREAIPDS NFKLIAGMPP SNYSDIIEES QIASDLGANF IIVLVPGYFG
TKLVTQQGII DYFKIVADGS SLPIMIYNYP GVVNGVDIEV STFEELAKHP FIVGVKLTHF
NLDTYTLLGK NPILSANNFT PFTGLGQVLV PALSVNIKGA IDGLSGIFPK TMLKLLKLYE
SGKFEQAADL QYLVTRANMM IGEFNVYGVK YTLKQIYDLG DCITGRPPLS TNIDTEKYKK
YQNDIDLLLK YENSL
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