| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56808 |
|---|
| Symbol | RAD26 |
|---|
| ID | 4838141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1669235 |
|---|
| End bp | 1672702 |
|---|
| Gene Length | 3468 bp |
|---|
| Protein Length | 1067 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640389456 |
|---|
| Product | DNA dependent ATPase |
|---|
| Protein accession | XP_001383607 |
|---|
| Protein GI | 150864673 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0205871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGT TCAACCGGGA CCTTGAAGCT CTTGGAGCAA AGCTTGTGGA TCAGGACAGT
CTTGAGACTT CCATCACAAG AAGAGCCAAT GAAGCCCTTC TTTCCAAAGA CGCGGAGTTG
GACCAGAAAC GTTTAGAAAA AGCTACGAAG GATTTGAACT CAACTTTAAA AAGAATCAGT
ATTCTTGAAA GCAGACTAAA TAACCCGAGA ACGAAGTTGA GCGAACGGCA GAAGCTCAGG
GATGAAATCA AATGGTTTGA ACAGAATGAA TTGGTACCGC GAAGACGCGA TGTAGAAGAT
ATCACTGCCA GGCTCGAAGA AAGCAAGAAA CAGTTGGATG GAGCTCAATC TGCTAAAGAA
GGCAATACTG TGGAATCGAA GAATGAGAAG CTTCCAGGAG AAACAGAAAA AGAATTCTTG
ATCAGAACTG GAAAGATTAC TGCGTTTGGA AATATCAACT CTTTCCAACA GATTGGTCAA
GAAACAGAAC AAGTGAAGAG TCATGTATTT TTACGAGCTC CAGGGTTTGA GGATACCCAG
ACAATGAAAA TTGAGAAAAG GAAAGAAGAT TTTGATATGG ATAACACAGT AGAACAGGAT
AGCATAGATG AAGATGAAGA ATCATACGAT GATAACGGAG CATTACTTGA AGATCAGGAT
CGTGACCAAG ATTTTCAGGA TACGCAAGAA GATTTAGGAG AAGATTCTGA TGGTTCTGTG
TATGAAGTCG AAAAAGAAGA AGACAGTAAT TCTGATTCGG AGACACCTAT AGTCAAAACG
GAAGAAGACG ATTTAATTGA AAATAACAAT TACGATTCAG AAGAACTTAA CGATGCTGAA
GAGGAACTGT CCACTACGTA TCTCCGAAAT GTTGATGATG GAGACGAGCT TGTCTACCAA
CAGAGACTTA GACAGTGGGT TTCCAGAAGA GCCAGTCTTC GTGGAACTGA GGTTTCGGAT
TCAAGCAAGC AAGAGTGGTT CAAACCTCAT CCCACGATTC CTGACGCAGT GCTTAACAAC
CAATTCAAAT TACCTGGCGA TATTTACCCG TCCTTATTTG ACTATCAAAA GACGTGTGTT
CAATGGCTCT GGGAATTGTA TTCCCAAAAG ACAGGAGGAA TTATTGGTGA TGAAATGGGA
TTAGGAAAAA CGATTCAGGT AATTTCTTTC GTAGCAGGTC TTCACTATTC TGGACTACTT
GACAAACCGG TACTCGTTGT AGTGCCTGCT ACGGTATTGA ACCAGTGGGT TAACGAGTTT
CACAGGTGGT GGCCACCTTT ACGTTGTATC ATATTACATA GCATAGGCTC TGGGATGGGG
AAGAGTGCTG TTAGATCTGA AGAAAAACTT GAAGAGTTTT TGGAAAATAG TGATCCTACT
CAGTCAAAGA ACTCTTTACG TGGCATCAAC AGTCAGATAA ATGCAAAGGA AATTGTTGAC
AGAGTTATGG AAAAGGGACA TGTCTTGGTG ACAACTTATG TCGGCTTGAG GATATACTCC
AAACATATTC TTCCACGAGA ATGGGGATAT GTTGTTTTGG ATGAAGGTCA CAAGATTAGA
AACCCAGACC TGGATATTTC ATTGACTTGT AAGCAAATTA AGACCTACAA CAGAATAATT
TTGTCTGGAA CGCCAATCCA GAATAACTTG ATAGAGTTAT GGTCATTGTT TGATTTTGTC
TTTCCCGGAC GTTTGGGGAC TTTACCTGTA TTCCAGCAAC AATTCTCTAT TCCTATAAAT
ATGGGAGGGT ATGCCAATGC TTCGAACATA CAAGTACAAA CTGGGTACAA GTGTGCTGTT
ATTCTTCGTG ATTTGATTTC GCCGTATTTG TTGAGAAGAC TCAAAAGCGA TGTCGCTCAG
GATTTGCCTA AGAAAAATGA GATGGTTTTG TTCGTGAAAC TAACTCAAGT TCAACAGGAG
CTCTATGAAA AGTTTTTGCA TAGTGAGGAG TTGAGCTCTA TATTGAAAGG CAGACGAAAT
GTCTTGATGG GTGTTGATAT ACTTCGAAAA ATATGTAATC ATCCTGATTT GGTAAATCGT
GATATCCTTG AACATAAGAA GAACTATAAC TATGGAAATC CTGTTAAGTC AGGAAAAATG
CAAGTTTTGA AGAACTTGTT GCAATTATGG CAGAGTCAGG AGCATAAGAC GTTGTTGTTT
TGCCAGACCA GACAGATGCT CGATATCTTA GAGAAGTTTG TAGCTAATCT CAGACTCTTG
GATATCGATC GTCCTGGTGA GGAAAAGCCA GATGAATATT TTACCTATTT GCGAATGGAC
GGGTCAACTC CAATTGCCAA GAGACAGGAT CTTGTGGATA AATTCAATTC TGATCCTAAC
TTACATGTTT TCTTGTTGAC AACTAAGGTA GGTGGACTTG GTGTGAACTT AACTGGGGCT
GATAGAGTTA TCATTTACGA TCCTGACTGG AATCCGTCTA CAGACATCCA GGCTAGAGAA
AGAGCATGGC GTTTGGGCCA GAAGAAAGAT ATTACGATCT ATCGATTAAT GACTACAGGG
TCGATTGAAG AAAAGATATA TCACCGACAG ATATTCAAGA CATTCCTCAC CAACAAGATT
TTGAAAGATC CCAAGCAGAG AAGATTCTTC AAAGTCAACG ATTTGCACGA CTTGTTTACT
TTGGGAGATC AAAACGAGGT CGGAACAGAA ACAGGAGACA TGTTCAATGG ATCTGAAACA
AACTTTGGAG GCAACAAGAC GAGAGCTCCT TCCACTTTGC TCAAGAAAAA GCACAAGAAC
GACGACGATT TCTATAAGGT TGCTAGTATA ACTGGAGTTT CAAAGTTGGA CAAGTTTCAG
GGTGATGAGG AAGAAGAGGA AGTGAGCGGA GAGTCTCGTG ATGAGAACAG AATCATGGAA
GGCATCTTTG CTAATAGTGG TGTACACAGT GCCTTGAAGC ATGATGAGAT TATCAATTCT
AGTAACCAAG AAATGTCTCT TGTTGAAAAA GAAGCTAGCA AAGTAGCCAA CGAAGCAGCT
CTGGCATTGA AGAGATCCAG AAAACTAGCC AGAAGAAATG AAATTGGCAC TCCTACGTGG
ACAGGTAAGT TTGGCTTAGC TGGTAGGTTT GGCCAGAAGA AGAAAACAGT ATCAGGTAGG
ATAAATAAAT CTAGTGGCTC TGGTGTGCTA TCGTCAGAGT CGATTTTAGG AGAGTTGAAG
CAGAAGAAAG CAGTCAGAGC TTCTGTGTTC ACCAAAAAAT CCAATTCCAG TGAAAATAAT
GAAGCTGTGG ATAAGAAGGC CACAATCGAG AAATTGGTTA CTTTCTTGCA ATCTCGGCCA
GATTCGTTCG GAACGTCGCT GGTGATCTTG AAGAATGCTG GTGTTGCCAT GAAAGACGAA
AACGACATGA TCCTTATTCG CTCAATGCTA CGGGAGATTG CTGTATGGGA TTCTGGTAGA
AGTGGATGGA AGTTGAAGAA AGAATTCTCT CAGAATGAAG AATTGTAA
|
|---|
| Protein sequence | MSEFNRDLEA LGAKLVDQDS LETSITRRAN EALLSKDAEL DQKRLEKATK DLNSTLKRIS
ILESRLNNPR TKLSERQKLR DEIKWFEQNE LVPRRRDVED ITARLEESKK QLDGAQSAKE
GNTLPGETEK EFLIRTGKIT AFGNINSFQQ IGQETEQVKS HVFLRAPGFE DTQTMKIEKR
KEDFDMDNTD RDQDFQDTQE DLGEDSDEES STTYLRNVDD GDELVYQQRL RQWVSRRASL
RGTEVSDSSK QEWFKPHPTI PDAVLNNQFK LPGDIYPSLF DYQKTCVQWL WELYSQKTGG
IIGDEMGLGK TIQVISFVAG LHYSGLLDKP VLVVVPATVL NQWVNEFHRW WPPLRCIILH
SIGSGMGKSA VRSEEKLEEF LENSDPTQSK NSLRGINSQI NAKEIVDRVM EKGHVLVTTY
VGLRIYSKHI LPREWGYVVL DEGHKIRNPD SDISLTCKQI KTYNRIILSG TPIQNNLIEL
WSLFDFVFPG RLGTLPVFQQ QFSIPINMGG YANASNIQVQ TGYKCAVILR DLISPYLLRR
LKSDVAQDLP KKNEMVLFVK LTQVQQELYE KFLHSEELSS ILKGRRNVLM GVDILRKICN
HPDLVNRDIL EHKKNYNYGN PVKSGKMQVL KNLLQLWQSQ EHKTLLFCQT RQMLDILEKF
VANLRLLDID HEYFTYLRMD GSTPIAKRQD LVDKFNSDPN LHVFLLTTKV GGLGVNLTGA
DRVIIYDPDW NPSTDIQARE RAWRLGQKKD ITIYRLMTTG SIEEKIYHRQ IFKTFLTNKI
LKDPKQRRFF KVNDLHDLFT LGDQNEVGTE TGDMFNGSET NFGGNKTRAP STLLKKKHKN
DDDFYKVASI TGVSKLDKFQ GDEEEEEVSG ESRDENRIME GIFANSGVHS ALKHDEIINS
SNQEMSLVEK EASKVANEAA SALKRSRKLA RRNEIGTPTW TGKFGLAGRF GQKKKTVSGR
INKSKSILGE LKQKKAVRAS VFTKKSNSSE NNEAVDKKAT IEKLVTFLQS RPDSFGTSSV
ILKNAGVAMK DENDMILIRS MLREIAVWDS GRSGWKLKKE FSQNEEL
|
|---|
| |