Gene PICST_56638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56638 
SymbolCP52L 
ID4838184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1817723 
End bp1819291 
Gene Length1569 bp 
Protein Length522 aa 
Translation table12 
GC content41% 
IMG OID640389499 
ProductCytochrome P450 52A12 (Alkane hydroxylase 1) (Alkane-inducible p450alk 1) (DH-ALK2) 
Protein accessionXP_001383636 
Protein GI150864699 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCG AAACAATCGT CCAGTACTTG CTGTGTTGGC AAGTATACGT TCTTGCAGTA 
TTGGTCTACC ACATTTTCAA CTGGATTCAC GAACAAATAT TGTACAAGAA GTTTGGAGCT
TCTCCTTGTA TCAACAATGA AAGAGGAGGC TTCCTTGGTA TCAGACTTTT GAGGACGTTG
TTGAAGGCGA AGCTGGACGG AACGCTATCG GATGTTGTGA AGAATAGATA CTACGAAATG
GAACATCCTG AAATAGAAAC GTTTACGCTG AGAGTGTTTT CACAAACCGT CATTGCAACA
AGAGATCCTG CCAATCTCAA GGCCATTTTG GCTACTCAAT TCAATGACTT TAGTTTGGGC
ATTAGACATG CTCAGTTATA TCCGTTGTTG GGAGATGGTA TCTTTACTTT AGATGGTGAA
GGATGGAAAC ATTCCAGAGC CATGTTGAGA CCACAATTTG CCAAGGAGCA GATTGCACAT
GTTCAGTCGT TAGAGCCACA TATTCAAGTG TTGGCAAAAC ATATTCGAAA ATCAGAAGGA
AAGTCGTTCG AAATGCAAGA ATTGTTTTTC AGGTTAACTC TCGATTGTGC TACAGAATTC
TTGTTCGGCG AATCAGTCGA ATCATTAAGA GATGCATCAA TTGGGATGGC GCGAGCTGAT
GTGGAAGTTG AAGGAAAAGA CCGGTTTGCA GAAGCGTTTA ACTTAGCCCA GACCCAAATT
GCTACGAGAT CGATGATGAA CAAAATGTAC TTCCTATACA ATACGGAAGA ATTACGGAAT
TCTTGCGATG TTGTTCACAG ATTCACAGAT TACTATGTCA ACCTTGCTTT GCGGACATCA
ACAGCAGAAT TAGATAAAAA ATCTAAGAGC GGTTATACCT TCTTGTATGA ATTGGTCAAA
CAAACCAGAA ATCCACAGAT TTTGAGAGAT CAGTTATTGA ATATCTTGTT GGCTGGTAGA
GATACGACTG CTGGTTTGTT GTCTTTCGCT TTCTTTGAAT TGGCTCGTCA ACCACATATT
TGGGCGAAGT TGAAGGATGA AATCTACTCT GCGTTTGGGT CTGGTGAAAA CTCGAGAATA
GATGAAATCA CTTTTGAATC TTTAAAGAGG TGTGAGTACT TGAAAGCCGT TCTTAACGAA
ACTTTGAGGA TGTATCCATC TGTCCCCAAT AATGGTAGGA TTGCTGTAAG GAATACAACG
CTACCAAGGG GCGGGGGACC AACAGGCACC GAACCTATGT TGGTAAGAAA GGGTCAGAAA
GTTGTCTATA GTGTCTATAC GACCCACAGA AGTAAAACAC ATTACGGTGA AGATGCCGAA
GTCTTTAGAC CTGAAAGATG GTTTGAGCCC TCGTCCAGAA AGCTCGGCTG GGCGTATCTT
CCTTTCAATG GTGGACCACG TATTTGCTTA GGACAACAGT TTGCATTAAC TGAAGCATCT
TATGTAGTAA CGAGATTGAT TCAAATGTTC CCTAATATCA GCTCCGATCC AACGATAGAA
TATCCTCCCA GAAAAGCTTC ACAATTGACT ATGTGTCTCC AAGATGGGCT TCTTATTTCC
TTGTATTGA
 
Protein sequence
MTVETIVQYL SCWQVYVLAV LVYHIFNWIH EQILYKKFGA SPCINNERGG FLGIRLLRTL 
LKAKSDGTLS DVVKNRYYEM EHPEIETFTS RVFSQTVIAT RDPANLKAIL ATQFNDFSLG
IRHAQLYPLL GDGIFTLDGE GWKHSRAMLR PQFAKEQIAH VQSLEPHIQV LAKHIRKSEG
KSFEMQELFF RLTLDCATEF LFGESVESLR DASIGMARAD VEVEGKDRFA EAFNLAQTQI
ATRSMMNKMY FLYNTEELRN SCDVVHRFTD YYVNLALRTS TAELDKKSKS GYTFLYELVK
QTRNPQILRD QLLNILLAGR DTTAGLLSFA FFELARQPHI WAKLKDEIYS AFGSGENSRI
DEITFESLKR CEYLKAVLNE TLRMYPSVPN NGRIAVRNTT LPRGGGPTGT EPMLVRKGQK
VVYSVYTTHR SKTHYGEDAE VFRPERWFEP SSRKLGWAYL PFNGGPRICL GQQFALTEAS
YVVTRLIQMF PNISSDPTIE YPPRKASQLT MCLQDGLLIS LY