Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56638 |
Symbol | CP52L |
ID | 4838184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1817723 |
End bp | 1819291 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389499 |
Product | Cytochrome P450 52A12 (Alkane hydroxylase 1) (Alkane-inducible p450alk 1) (DH-ALK2) |
Protein accession | XP_001383636 |
Protein GI | 150864699 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2124] Cytochrome P450 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCG AAACAATCGT CCAGTACTTG CTGTGTTGGC AAGTATACGT TCTTGCAGTA TTGGTCTACC ACATTTTCAA CTGGATTCAC GAACAAATAT TGTACAAGAA GTTTGGAGCT TCTCCTTGTA TCAACAATGA AAGAGGAGGC TTCCTTGGTA TCAGACTTTT GAGGACGTTG TTGAAGGCGA AGCTGGACGG AACGCTATCG GATGTTGTGA AGAATAGATA CTACGAAATG GAACATCCTG AAATAGAAAC GTTTACGCTG AGAGTGTTTT CACAAACCGT CATTGCAACA AGAGATCCTG CCAATCTCAA GGCCATTTTG GCTACTCAAT TCAATGACTT TAGTTTGGGC ATTAGACATG CTCAGTTATA TCCGTTGTTG GGAGATGGTA TCTTTACTTT AGATGGTGAA GGATGGAAAC ATTCCAGAGC CATGTTGAGA CCACAATTTG CCAAGGAGCA GATTGCACAT GTTCAGTCGT TAGAGCCACA TATTCAAGTG TTGGCAAAAC ATATTCGAAA ATCAGAAGGA AAGTCGTTCG AAATGCAAGA ATTGTTTTTC AGGTTAACTC TCGATTGTGC TACAGAATTC TTGTTCGGCG AATCAGTCGA ATCATTAAGA GATGCATCAA TTGGGATGGC GCGAGCTGAT GTGGAAGTTG AAGGAAAAGA CCGGTTTGCA GAAGCGTTTA ACTTAGCCCA GACCCAAATT GCTACGAGAT CGATGATGAA CAAAATGTAC TTCCTATACA ATACGGAAGA ATTACGGAAT TCTTGCGATG TTGTTCACAG ATTCACAGAT TACTATGTCA ACCTTGCTTT GCGGACATCA ACAGCAGAAT TAGATAAAAA ATCTAAGAGC GGTTATACCT TCTTGTATGA ATTGGTCAAA CAAACCAGAA ATCCACAGAT TTTGAGAGAT CAGTTATTGA ATATCTTGTT GGCTGGTAGA GATACGACTG CTGGTTTGTT GTCTTTCGCT TTCTTTGAAT TGGCTCGTCA ACCACATATT TGGGCGAAGT TGAAGGATGA AATCTACTCT GCGTTTGGGT CTGGTGAAAA CTCGAGAATA GATGAAATCA CTTTTGAATC TTTAAAGAGG TGTGAGTACT TGAAAGCCGT TCTTAACGAA ACTTTGAGGA TGTATCCATC TGTCCCCAAT AATGGTAGGA TTGCTGTAAG GAATACAACG CTACCAAGGG GCGGGGGACC AACAGGCACC GAACCTATGT TGGTAAGAAA GGGTCAGAAA GTTGTCTATA GTGTCTATAC GACCCACAGA AGTAAAACAC ATTACGGTGA AGATGCCGAA GTCTTTAGAC CTGAAAGATG GTTTGAGCCC TCGTCCAGAA AGCTCGGCTG GGCGTATCTT CCTTTCAATG GTGGACCACG TATTTGCTTA GGACAACAGT TTGCATTAAC TGAAGCATCT TATGTAGTAA CGAGATTGAT TCAAATGTTC CCTAATATCA GCTCCGATCC AACGATAGAA TATCCTCCCA GAAAAGCTTC ACAATTGACT ATGTGTCTCC AAGATGGGCT TCTTATTTCC TTGTATTGA
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Protein sequence | MTVETIVQYL SCWQVYVLAV LVYHIFNWIH EQILYKKFGA SPCINNERGG FLGIRLLRTL LKAKSDGTLS DVVKNRYYEM EHPEIETFTS RVFSQTVIAT RDPANLKAIL ATQFNDFSLG IRHAQLYPLL GDGIFTLDGE GWKHSRAMLR PQFAKEQIAH VQSLEPHIQV LAKHIRKSEG KSFEMQELFF RLTLDCATEF LFGESVESLR DASIGMARAD VEVEGKDRFA EAFNLAQTQI ATRSMMNKMY FLYNTEELRN SCDVVHRFTD YYVNLALRTS TAELDKKSKS GYTFLYELVK QTRNPQILRD QLLNILLAGR DTTAGLLSFA FFELARQPHI WAKLKDEIYS AFGSGENSRI DEITFESLKR CEYLKAVLNE TLRMYPSVPN NGRIAVRNTT LPRGGGPTGT EPMLVRKGQK VVYSVYTTHR SKTHYGEDAE VFRPERWFEP SSRKLGWAYL PFNGGPRICL GQQFALTEAS YVVTRLIQMF PNISSDPTIE YPPRKASQLT MCLQDGLLIS LY
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