Gene PICST_43654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_43654 
SymbolCDG1 
ID4838258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1231849 
End bp1232526 
Gene Length678 bp 
Protein Length225 aa 
Translation table12 
GC content45% 
IMG OID640389573 
Productcysteine dioxygenase 
Protein accessionXP_001383519 
Protein GI150864622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.277874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTC CGCGGGTTGC TGTTGAAGGA CCCGCTGTCA ATGTGGATTC TACTACTATC 
GATTGCATAT CTCCCGATAG TGACTTCTAT GTCTTGATCC AGCAGCTCAA GCTGTTGTTG
GGCAAAGACA AGGGCCTTGC TTCTGAAGAT ATCGACATCA ATGAAGTGAG AAGGATCATG
GAAAACTATA CTTCCAACGA TATGGACTGG TTAAAAATGG CATTGCACGA TGTGTCCAGA
AACTACTCCA GAAATGGAAT TATCAACATC AACAACAATG CCAACTTGCT CATATTGGTG
TGGTCTCCAG GAAAGTCTAG CGCTATCCAT GACCACGCCA AAGCTCACTG CTGTATGAAG
ATCTTGTCTG GCGAATTGGT TGAGTCTCTC TATGAATTTC CACAAGATGA AGGTAGCCAT
ATGAAGTGTG TCAAACAGAC AACCATGCAC AGAGATGAAG TAGGTTACAT TTCGGACAAT
ATCGGCTTGC ACAAGATCTC CAATCCTCAG TCAGATAAAG TGTCTGTATC TTTGCATTTG
TATACTCCAC CATATGCTTC CATGTACGGC TGCTCGATGT ATGAGGCAGC CAACGGAAGA
AAGCACCATG TGGACATGAG CAAGTACTAC AGTTGGCAGG GCCAATTGAT CAATCCCAAA
GACAGTCTGA CATGCTAA
 
Protein sequence
MSSPRVAVEG PAVNVDSTTI DCISPDSDFY VLIQQLKSLL GKDKGLASED IDINEVRRIM 
ENYTSNDMDW LKMALHDVSR NYSRNGIINI NNNANLLILV WSPGKSSAIH DHAKAHCCMK
ILSGELVESL YEFPQDEGSH MKCVKQTTMH RDEVGYISDN IGLHKISNPQ SDKVSVSLHL
YTPPYASMYG CSMYEAANGR KHHVDMSKYY SWQGQLINPK DSSTC