Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_43654 |
Symbol | CDG1 |
ID | 4838258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1231849 |
End bp | 1232526 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389573 |
Product | cysteine dioxygenase |
Protein accession | XP_001383519 |
Protein GI | 150864622 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.277874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCTC CGCGGGTTGC TGTTGAAGGA CCCGCTGTCA ATGTGGATTC TACTACTATC GATTGCATAT CTCCCGATAG TGACTTCTAT GTCTTGATCC AGCAGCTCAA GCTGTTGTTG GGCAAAGACA AGGGCCTTGC TTCTGAAGAT ATCGACATCA ATGAAGTGAG AAGGATCATG GAAAACTATA CTTCCAACGA TATGGACTGG TTAAAAATGG CATTGCACGA TGTGTCCAGA AACTACTCCA GAAATGGAAT TATCAACATC AACAACAATG CCAACTTGCT CATATTGGTG TGGTCTCCAG GAAAGTCTAG CGCTATCCAT GACCACGCCA AAGCTCACTG CTGTATGAAG ATCTTGTCTG GCGAATTGGT TGAGTCTCTC TATGAATTTC CACAAGATGA AGGTAGCCAT ATGAAGTGTG TCAAACAGAC AACCATGCAC AGAGATGAAG TAGGTTACAT TTCGGACAAT ATCGGCTTGC ACAAGATCTC CAATCCTCAG TCAGATAAAG TGTCTGTATC TTTGCATTTG TATACTCCAC CATATGCTTC CATGTACGGC TGCTCGATGT ATGAGGCAGC CAACGGAAGA AAGCACCATG TGGACATGAG CAAGTACTAC AGTTGGCAGG GCCAATTGAT CAATCCCAAA GACAGTCTGA CATGCTAA
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Protein sequence | MSSPRVAVEG PAVNVDSTTI DCISPDSDFY VLIQQLKSLL GKDKGLASED IDINEVRRIM ENYTSNDMDW LKMALHDVSR NYSRNGIINI NNNANLLILV WSPGKSSAIH DHAKAHCCMK ILSGELVESL YEFPQDEGSH MKCVKQTTMH RDEVGYISDN IGLHKISNPQ SDKVSVSLHL YTPPYASMYG CSMYEAANGR KHHVDMSKYY SWQGQLINPK DSSTC
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