| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43371 |
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| Symbol | RRP9 |
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| ID | 4837871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 257438 |
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| End bp | 259039 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389186 |
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| Product | part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA) |
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| Protein accession | XP_001383331 |
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| Protein GI | 150864494 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAG ATCCATTCTT GTCAGATCCA CTGCGGAAAA GAAAACGTTC TACCAAACTT
ACCAGTCGAG TGAATAAGTC CAGTCGAAAT TCTACACCTA GTAACAATAA TAGATACCCA
GAAAATGATG AGGAAATCAG TGGAGATAGC GACACTGATG AGGAAATAAA TGAGCAAGTT
GATGAGGAGA TTGATGACGA TGTTATGTCA TCTGATGAAG AGTTTGCTGA CGAAAATGCC
ACAGAAAAAA GAAGAAGATT GGCCAAACAA TATTTGGAAA ACTTGAAAAA TGATGAAGGT
CAGGACCAGG ACTTCGATGC CCAAGACCTA GACGACGATA TTGTTTCACG TAGATTGCAG
GTAGATGTGG CCGAAAGCAA AGGTTATGTT TACAAATTCG TAGGCAACAA GATTCTGTCT
CAGATCGACG ACAACATCCA GATCATCACC ACGAGAATAG GTCTGAAGAA CTTGACCAGT
TTGGCTGTAC GTTATCCAAG CTTGTATACT GTCTCCAAAG ATTCTGAGTT GATCAAGTGG
GACATCTCTG TGGAGAACAA AAAGCCCGTG AGAATAAGAC ACGTGAAAGG AGGACACAAA
TACTTCAACG TGAATACATC AAATGTCAGT CTCAATCACC ACTGGGACCA GATCAACTGT
GTGGCGGCTT CTTCAGATGG CAAGTATGTA GTAACTGGAG GCAACGATGC TCGTTTGATC
ATTTGGTCCT CTGAGAACTT GGCATGTTTA AAAGTTTTGG AAACTAGAGT CGCTGTCAAC
TCCATCACTT TCCGTAGAAA CTCGGACCAG TTGTATGCTG CCTGTGCAGA TTTAAAAATC
AGAACATACT CCATCAACCA GTTTACTCAG CTAGAAGTTC TCTATGGGCA TCAAGACAAC
ATTTCCGATA TTTCAGCCTT GGCTAGAGAA ACTTGTGTAT CTGTAGGGTC TCGTGACAAG
ACGGCGATGT TCTGGAAAAT CGCTGAGGAG TCCCGTCTCA CATTCAGAGC TGGAGATTCA
CTGGATAAGA AGAAGAAAAG GGCTAAAAAG ACGGAAGAAC CAGTTGAACC TGTAGAAGAG
GCGGCTTTCC ATAATGAAGG ATCTGTGGAG GTAGTGTCGA TGGCTGATGA GTCTCACTTT
GTCACAGGAT CAGATAATGG GAATGTTGCT TTATGGTCTT TAGCCAAAAA GAAAGCATTA
TTTACTCAGC GATTGGCTCA TGGCTTACAG CCCCAATTCT TACCCTCTGA AGCTTCTGCT
GAAACATCTG TAGAAGTGGC TAGTCGTCAA GTACCAGAAC GACTTCCCTA CTGGATCACA
GCAGTTCACA GTGTACCATA TAGTGATGTT TTTTTTACAG GCTCTTTCGA CGGAACTGTA
AGAGCATGGA AGCTCGACAA CGACCGGTTG AATTCGTTCC AATTGCTTGG TGAAATTGCC
AACGTCAATG GATGTGTGGT GAAAATTGAT TCAGCCGAGA TTCCTGAACT CAAGAAATTG
GCTGTGTATG TTCTTGTCTC TAAAGAACAC AAGTTTGGAA GATGGTTGGG CAAGCTCAAG
GGAGGCAGAA ATGCTTTGCT CAGCTTCACT TTTGATATCT AA
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| Protein sequence | MAGDPFLSDP SRKRKRSTKL TSRVNKSSRN STPSNNNRYP ENDEEISGDS DTDEEINEQV
DEEIDDDVMS SDEEFADENA TEKRRRLAKQ YLENLKNDEG QDQDFDAQDL DDDIVSRRLQ
VDVAESKGYV YKFVGNKISS QIDDNIQIIT TRIGSKNLTS LAVRYPSLYT VSKDSELIKW
DISVENKKPV RIRHVKGGHK YFNVNTSNVS LNHHWDQINC VAASSDGKYV VTGGNDARLI
IWSSENLACL KVLETRVAVN SITFRRNSDQ LYAACADLKI RTYSINQFTQ LEVLYGHQDN
ISDISALARE TCVSVGSRDK TAMFWKIAEE SRLTFRAGDS SDKKKKRAKK TEEPVEPVEE
AAFHNEGSVE VVSMADESHF VTGSDNGNVA LWSLAKKKAL FTQRLAHGLQ PQFLPSEASA
ETSVEVASRQ VPERLPYWIT AVHSVPYSDV FFTGSFDGTV RAWKLDNDRL NSFQLLGEIA
NVNGCVVKID SAEIPELKKL AVYVLVSKEH KFGRWLGKLK GGRNALLSFT FDI
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