| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43041 |
|---|
| Symbol | |
|---|
| ID | 4837812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1643892 |
|---|
| End bp | 1645043 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640389127 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383599 |
|---|
| Protein GI | 150864666 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCCG TTGCTGCTGC TACTAGATAC GACCCCTCGC AGTTCAACCC TGAACATAAT
GCCACAACGG AATCTGGGTC TTATACCATC AGCAAGGACA ATAGGGCTAT TGCCAAATTC
CCTGATTTTG TTCCAACCTG GAACCCCAAC CAGAAGTTCC CACCTTTGAA GTTCTTCAAA
CATACCGACA AAGGAACATT GGCTGATCCA GAATTAAGGA ACTTGTTCCC AGCCAATGGT
ACCCATAAAG TCAAGAAGGT TACTCCCAAG CTTGGCTCCG AAGTCCATGG AATTCAGTTG
TCTCAACTTG ATGATAAGGG CAAAAACGAC TTGGCTCTCT TTTTAGCCCA GAGAGGTGTT
GCTATTTTCA GAGACCAAGA CTTCAGCAGT TATGGTCCTG AATTTGCTGT AGAATACGGC
AAGTACTTTG GTCCATTGCA TGTTCATCCT ACCTCGGGGT CTCCAGAAGG GTTTCCTCAG
TTGCATATTA CGTTCAGAGG CGCCTCTCAG AATGAATTGG ACAGTGCCTT CGAGACTAGA
ACGAACAACA TTGGCTGGCA TTCTGACGTT TCATACGAGC TCAACCCTCC TCAAATAACA
TTTTTCAGCG TTCTTGAGGG ACCTGAATCT GGGGGTGATA CCATTTTCGC CGACACTCAA
GAAGCGTATA AGAGATTGAG CCCAACCATG CAAAAGATGT TGGAAGGTTT ACACGTTTTG
CATACTTCTG AAGATCAAGC CCATATCAAC CAGGCTGCAG GTGGAATCTG TAGAAGAGCT
CCTGTTTCTA ACATACACCC TCTTGTAAGA CAACACCCGG TGACAAAAGA AAAATTCTTG
TTTTTGAATA GGGAGTTCGG TAGAAGAATT GTAGAGTTGA AAGAGGAAGA ATCAGAGAAT
TTGCTTGAAT TCTTGTTCAA CCATGTTGAG CTGGCTCACG ACTTGCAACT CAGAGCCAAC
TGGGAACCTA ACACGGTGGT TTTATGGGAC AACAGAAGAA CTGTCCACTC AGCCATTATC
GATTGGGATA CTCCAGTGTT AAGACACGCA TTTAGAATCA GTCCCCAAGG AGAAAGGCCC
GTGGAAGACT TGAAGGATTT GAATAATGAG AGTTATTTAA AAGAAAAGTA CTCCGTTATT
AAGAGAGGTT AA
|
|---|
| Protein sequence | MAPVAAATRY DPSQFNPEHN ATTESGSYTI SKDNRAIAKF PDFVPTWNPN QKFPPLKFFK
HTDKGTLADP ELRNLFPANG THKVKKVTPK LGSEVHGIQL SQLDDKGKND LALFLAQRGV
AIFRDQDFSS YGPEFAVEYG KYFGPLHVHP TSGSPEGFPQ LHITFRGASQ NELDSAFETR
TNNIGWHSDV SYELNPPQIT FFSVLEGPES GGDTIFADTQ EAYKRLSPTM QKMLEGLHVL
HTSEDQAHIN QAAGGICRRA PVSNIHPLVR QHPVTKEKFL FLNREFGRRI VELKEEESEN
LLEFLFNHVE SAHDLQLRAN WEPNTVVLWD NRRTVHSAII DWDTPVLRHA FRISPQGERP
VEDLKDLNNE SYLKEKYSVI KRG
|
|---|
| |