| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35479 |
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| Symbol | YOD1 |
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| ID | 4837725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 589168 |
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| End bp | 590565 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389040 |
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| Product | aminotransferase |
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| Protein accession | XP_001383746 |
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| Protein GI | 150864775 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.304884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGTTG AAGACCAAAA ATCTTACATT TTCCAAGCCA AGATTGATGA ACAAGTTCCA
GTCGTTCTCA AAGGGGAAGG CACAAAAATC ACAGTTGAAA AAGATGGTGA AACTAGAGAA
TTGCTTGATG GTGTCACCGG CGCAGCTGTA GGTGCCTTGG GTTGGGGAGA CCCTGATGTA
TTGGAAATGA TCAATGAAGC TGCCAAGGTC ACTTCCTATT CGTACCCTGC TTTCATTGGA
AATAAGTACA GTGAAGCTCT TGCCAAGTTC TACATTGACA ATTCTCCCAA GGGCGCTTTC
GCTGCTGCCC AGTGGTGCGG TTCTGGATCC GAGTCGAACG AGAATGCCCT CAAGATCATC
AGACAGTACC ACATGGAAAA GGGAAACATG AAGAAGATCA AGTTCATCTC AAGAAAGACT
TCGTACCATG GTTTTACTAC TGGCGCTATG TCTATTTCCG ACAATGCCAA GGCAGCTGCT
TTTTCTGATA TCTTGTTACC CAAGGAACAG TTCTTGAAGA TGGATGTTTG TTACCCATAT
AGACATCAAA AGAAGACGGA AACAACTGAA GCGTACGTGC AAAGACTTCT TGCTAATTTG
GAAGATATCA TCACCGGAGA AGATCCTGAA ACAGTAGCTG CGGTCATTGT TGAAACATTG
CCAGGTAGTT CTTTAGGAAC CTCGCCTCCT CCTCCAGGTT ACTTGAATGG CATCAGAAAG
TTGTGTAACA AATACGATAT CGTAATGATG TTAGATGAAG TTATGTGTGG AACTGGTAGA
GTTTCACCAA ACGGAGGATT GAACTGTTGG GAAAACTTCT TGACTGCCGA AGAAGGTCCA
GACATCCAAA CTGTAGGAAA AACTTTGGGA TCTGGATATG TTACCATTGC CGGTATTTTA
ATTTCTCCTA AGATCAGAAA TGTGTTTCTT GCTGGTTCAG GACGCATTGC AGGTGCCCAC
ACATATTCTG GCCACGGTTT CAACTGTTTG GTTGCCTTAA AGATTCAAGA GAAAATCAAA
GCTCTTGGAT TGACAAAGAA CATCTTTGAA ATGGGTAACC ACATGGGTGC AAAGCTCCAG
GAGAGTTTGG CAGAACTGCC AATTGTAGGT GACGTTCGTG GACTTGGAGG ATTCTGGTCC
ATTGAGTTTG TCAAGAATAA GGACACCAAA GAGAGTTTCC CCATGCCACT CAATGTCACC
CGTCTTGTTC AGGATAAGTG CTTTGATAAC GGATTGACTG TCATGGGTAA CCAGGGATGC
AATGGAGGGG TTGGAGATCA CATCTGCATC GCACCTCACT TCATAGTATC TGAGGACGAG
ATTGAAACCA TAGTTTCGGT TGTCACCAAG TCTGTAGGGG AAATTGTTGA TGAGTTGAAG
GAAACAGGCG AATTGTAG
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| Protein sequence | MTVEDQKSYI FQAKIDEQVP VVLKGEGTKI TVEKDGETRE LLDGVTGAAV GALGWGDPDV
LEMINEAAKV TSYSYPAFIG NKYSEALAKF YIDNSPKGAF AAAQWCGSGS ESNENALKII
RQYHMEKGNM KKIKFISRKT SYHGFTTGAM SISDNAKAAA FSDILLPKEQ FLKMDVCYPY
RHQKKTETTE AYVQRLLANL EDIITGEDPE TVAAVIVETL PGSSLGTSPP PPGYLNGIRK
LCNKYDIVMM LDEVMCGTGR VSPNGGLNCW ENFLTAEEGP DIQTVGKTLG SGYVTIAGIL
ISPKIRNVFL AGSGRIAGAH TYSGHGFNCL VALKIQEKIK ALGLTKNIFE MGNHMGAKLQ
ESLAESPIVG DVRGLGGFWS IEFVKNKDTK ESFPMPLNVT RLVQDKCFDN GLTVMGNQGC
NGGVGDHICI APHFIVSEDE IETIVSVVTK SVGEIVDELK ETGEL
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