| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30885 |
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| Symbol | |
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| ID | 4838232 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1192495 |
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| End bp | 1194956 |
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| Gene Length | 2462 bp |
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| Protein Length | 806 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389547 |
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| Product | predicted protein |
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| Protein accession | XP_001383856 |
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| Protein GI | 150864861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0333554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA TCTCCAGACT CGCCCACTAC CAGAGACAGG ATCTCAAGAA CTTGATGTTG
CTACTCCAGG AGTTCGTCAT CACCTACAAG GACAACAAGG TCAAGATCAA CTACCAGTCA
AGACCTGTTA TCCTCTTCTT ATCAACTTTG GTGGCTACTG CTGGTTTTGG AGCCTACTTC
ACAGTGAGAA ACATCCTCAC CAAGTATAAC GAATATGTGC TAAACAAAAG GTTGGCACGT
CCTGCTTTGA TCAGACAGTC GTCAACAATA TTGAAGAATG GCTCGCGTGA GATCTTTATC
CCGAAAGGCA AGAATAAAGT GTCCAGAATC ATCATTCCCA AGCCTAATTT GGACCAGTAC
GCTGCTGACA AGTATTTGTA CAAGAATTTC ATCATCAACC AGGAGATCCA GAGCCAGCAG
AGAGGAACCA TCTTTAGTTC CAAGTTTCTC AGCCAGTTGG CTATCATATG GCGGATCTTG
ATTCCCAAGT TCTACTGTAA AAACACCTCA TTGTTACTTT CTCAGTGCTT TTTCCTCTTG
ATGAGAACAT GGTTGTCGTT ACTTGTAGCC AAGTTAGACG GTCAGATCGT TAAAAATTTG
ATTGCAGCCA ACGGGAGAAA ATTCTCGCGT GATTTGATCT ATTGGCTCTT AATTGCGTTC
CCAGCCTCAT ACACCAATGC CGCCATTAAG TACTTGGATA GTAGACTTTC ACTAGGCTTC
AGAACCAACC TTACAAGATA CATCCATGAC ATGTACTTGG ACAAAGTCAT GGCGTACTAC
AAAATCTCGT TGAACACCAA CGACATCCAG AACATCGACC AATACATTAC TAATGATGTA
GCCAAATTCT GTGATACACT CTCGGGTTTG TTCTCTAGTA TGGGTAAACC TTTCATAGAC
TTGATCTTTT TCTCGGTGTA TTTGAGGGAC AATTTAGGAA CAGGTGCAAT CATTGGTATT
TTCGCCAACT ACTTCCTTAC GGCAGCGTTG TTGAGAAGAG CTACACCAGC TTTTGGGAAG
TTGTCTTCGC GTAGAACTCA TTTGGAAGGA GCGTATTTCA ACGACCAGTT GAACTTGATG
ACCAACTGTG AAGAGATTGG TTTCTATAAG GGCTCCATAA TCGAGAAAGC CAAGCTTCAG
GAGAGTTTTC AAAATTTAAT GAGCCATGTC AATAAGGAAA TCAACATCTC GTTTCCGTAC
TCTATTTTAG AAGATTATGT CTTGAAATAC ACTTGGTCTG CTTGGGGTTA TATTTTTGCA
GGGTTGCCAG TATTCCTTGA CGAGATCTGG CCGGCTCAAG ATAAGCCGGA CACCAAAGCT
GATAAGAAAG CTGTTGCCGC GAATGAAAGA CAAAACATGA GACAATTCAT TATCAACAAG
AGATTGATGT TGTCTTTGGC AGATGCTGGC TCTAGATTGA TGTACTCTAT TAAGGATGTC
AACCAGTTGA CTGGATATAC CGACAGAGTG TTCAATTTAT TGACCAATTT GCACAAGGTG
CATTCTCCCA GATACAACTT TGGCTCTGCC CTTGGCTTTT CAGACATCCA TGGAACCATC
CAGAACAACT ACAACGATGG GATCAGATTC GAGAAGATTT CGGTGATCAT TCCCTCTTCT
TTAGGCTCGG AAAATGAGCC ATTGGTGGAA AATTTGAACT TCCAGGTGCT GCACAACAAG
AATTTGTTGA TTTTGGGATC CAACGGTTGT GGAAAGACAT CTATTGCTAG AATCATCGCT
GGCTTATGGC CATTGTACCG TGGATTATTG TCCAAACCCA ACGATGACGA TATTTTCTAT
TTGCCACAGA AGACATACTT CACCACTGGA AACTTACGTG ACCAAATCAT CTACCCATAC
ACCTATAACG ATATCTTGGA AATGGGCTAC AATGACGACT TCTTGTACCA TATTTTGCGT
GAGGTCAAGT TGGAGTATTT GTTGAAGAGA GAGGGCAACT TCAACGTCGT CAAAGACTGG
AAGGACGTGT TCAGCGGTGG AGAAAAGCAG AGAATGAGTA TTGCCAGAGT TTTGTTCAAG
AACCCCAAGT TGGTTATCTT GGACGAAAGC ACTAATGCTG TCTCAACCGA TGTGGAAGAT
TACCTCTTCG AATTGTTGCA GAAGAAAAAG ATCACCTTCA TCACCTTGAG TCACCGCCCC
TTGTTGATGA AGTATCATGA TTTTATCTTG GAGATTGAGG AAGACAGCAG CTGGAAATTC
CACGACTTGA CGTCTGAAGA AAACTTGAAG TCAATCGATA ACGAGATCAA TGAAATTGAA
GACAAGTTAG CACAAGTAGA TAAATGGGAA AAGAGAAAGA GCGACATCGA AAAGTACTTG
GATGGCAAGT ATGAAGACAT TGCTATTGAG TCCAGTATTG AGTTGCCAGC TCCATTAACT
TCTCAGAAGT AAGTAGCTAA TTAACGTGAA ATGACTGAAT AATGTGTAGT TGTAGTAGAT
GA
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| Protein sequence | MINISRLAHY QRQDLKNLML LLQEFVITYK DNKVKINYQS RPVILFLSTL VATAGFGAYF
TVRNILTKYN EYVLNKRLAR PALIRQSSTI LKNGSREIFI PKGKNKVSRI IIPKPNLDQY
AADKYLYKNF IINQEIQSQQ RGTIFSSKFL SQLAIIWRIL IPKFYCKNTS LLLSQCFFLL
MRTWLSLLVA KLDGQIVKNL IAANGRKFSR DLIYWLLIAF PASYTNAAIK YLDSRLSLGF
RTNLTRYIHD MYLDKVMAYY KISLNTNDIQ NIDQYITNDV AKFCDTLSGL FSSMGKPFID
LIFFSVYLRD NLGTGAIIGI FANYFLTAAL LRRATPAFGK LSSRRTHLEG AYFNDQLNLM
TNCEEIGFYK GSIIEKAKLQ ESFQNLMSHV NKEINISFPY SILEDYVLKY TWSAWGYIFA
GLPVFLDEIW PAQDKPDTKA DKKAVAANER QNMRQFIINK RLMLSLADAG SRLMYSIKDV
NQLTGYTDRV FNLLTNLHKV HSPRYNFGSA LGFSDIHGTI QNNYNDGIRF EKISVIIPSS
LGSENEPLVE NLNFQVSHNK NLLILGSNGC GKTSIARIIA GLWPLYRGLL SKPNDDDIFY
LPQKTYFTTG NLRDQIIYPY TYNDILEMGY NDDFLYHILR EVKLEYLLKR EGNFNVVKDW
KDVFSGGEKQ RMSIARVLFK NPKLVILDES TNAVSTDVED YLFELLQKKK ITFITLSHRP
LLMKYHDFIL EIEEDSSWKF HDLTSEENLK SIDNEINEIE DKLAQVDKWE KRKSDIEKYL
DGKYEDIAIE SSIELPAPLT SQNCSR
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