| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30809 |
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| Symbol | |
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| ID | 4838228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 996945 |
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| End bp | 998663 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389543 |
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| Product | predicted protein |
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| Protein accession | XP_001383476 |
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| Protein GI | 126133903 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0100169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACG GCGTCAAGGT GAATAATGTC TTCGCAAAGG CAGAAGAAAG CAGCGAATCC
GTACAAGTCC AAGAGCGCGC TGGAAACTTT TCCTCATCCT CTCTACCTGA AGAGAACAAG
CAGAACGATG TCGTAGTACA ACAACAAGAA GAAGAAGAAA AAGACTCCAA CAGCATATGG
GCCTACTTGG CAAATGCCTC GAAGAAGTTG GACTCGTTAG GAGTAGAAAC TAGAGGTATC
GAGAGAATAC AGCCATACGA AAGGTCTACC AATAAGACTA AACAACTTAT CTCTGTCATA
GGACTTTGGC TTTCTGCCTG TGGTGGGTTG AGTTCGATGT CTTCTTTCTA TTTAGGCCCG
CTTTTGTTTG AATTGGGTTT GAAAAAGACT TTGGTGTCTG GTTTAATTGG TCAAGGACTT
GGTTGTGCCA TTGCTGCCTA CTGTTCATTG ATGGGACCCA GATCTGGATG TCGTCAAATG
GTGGGAGCCA GATTTCTTTT CGGTTGGTGG TTCGTCAAGC TTGTTTCACT TGTCAGTATC
ATTGGAGTCA TGGGTTGGTC TGTTGTGAAC TGTGTTGTAG GTGGTCAAAT CTTGGCCAGT
ATCAGTGACG GAAAGATTCC TCTTGTGGTA GGTATTGTCA TAATTGCTGT CATCTCTCTT
GCAGTGGCTA TTGGTGGTAT CAAGCAGTTG TTGAAGGTGG AAACTCTTCT TGCACTTCCA
GTAAACTTTG CCTTCTTGCT TTTGTACGTT GTAGCCTCCA AGAAGTTTTC TTATCTTACC
ATGAACGATC CTATAGACGA CCATGCTACT CTTAAGGGTA ATTGGTTGTC TTTCTTTTCT
TTATGTTATT CCATTACTTC TACTTGGGGT TCCATTGCTT CTGATTACTA CATTTTGTTC
CCTGAAAACA CACCCGATTT GCATGTTTTC AGTATCACCT TCTTTGGCAT TCTTATTCCC
ACAACTTTTG TAGGTGTTGC TGGTCTTCTC ATCGGTAATG TTGCTTTGAC TTATGAGCCA
TGGGGCGATG CTTATGCTGA ATTCGGTATG GGTGGTTTGT TGAACGAAGC CTTCAAGCCA
TGGGGAGGAG GAGGAAAATT CTTGTTGATT CTTATCTTCC TCTCGTTGAT TTCCAACAAT
ATCTTGAACA CTTACTCAGC TGCCTTTGGA ATTCAATTGG CTGGACGTGT TCTTTCCCGT
ATTCCTCGTT GGCTCTGGGC CTTTGTGATC ACGGCGGTGT ATTTGGTCTG TGCCCTTGTA
GGGAGATACA AATTTGCTAC GATTTTGGGT AACTTCTTGC CTATGGTCGG GTACTGGATA
TCCATGTATT TCATAATATT GCTTGAAGAA AATATCATCT TTAGAACAGA CGCTTTCAAG
CACTTATTTA CCAAAGAATT CCCGCCAGAG TCTGAAGAAA CTGAAGGTAC ATCTAGAACC
ATAGTGATGG CTAAGAACAG TGCTAAGAAC CAACACTACA ACTTTGAAAT TTGGAACGAC
TACGACAGAT TGACACATGG CTTTGCTGCT ACAGCCTCTT TCATTGTAGG AGCTGCTGGA
GCTGCTGTGG GGATGTCACA GACATACTGG ATTGGACCTG TGGCTTTGGC TATGGGCGGT
GCGTACGGAG GAGATATAGC CATGTGGTTA TGTATGGGAT TCAGCGGAGT AGCATACCCA
GGATTAAGGT ACCTCGAGTT GAAGAAATAT GGACGTTAG
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| Protein sequence | MAYGVKVNNV FAKAEESSES VQVQERAGNF SSSSLPEENK QNDVVVQQQE EEEKDSNSIW
AYLANASKKL DSLGVETRGI ERIQPYERST NKTKQLISVI GLWLSACGGL SSMSSFYLGP
LLFELGLKKT LVSGLIGQGL GCAIAAYCSL MGPRSGCRQM VGARFLFGWW FVKLVSLVSI
IGVMGWSVVN CVVGGQILAS ISDGKIPLVV GIVIIAVISL AVAIGGIKQL LKVETLLALP
VNFAFLLLYV VASKKFSYLT MNDPIDDHAT LKGNWLSFFS LCYSITSTWG SIASDYYILF
PENTPDLHVF SITFFGILIP TTFVGVAGLL IGNVALTYEP WGDAYAEFGM GGLLNEAFKP
WGGGGKFLLI LIFLSLISNN ILNTYSAAFG IQLAGRVLSR IPRWLWAFVI TAVYLVCALV
GRYKFATILG NFLPMVGYWI SMYFIILLEE NIIFRTDAFK HLFTKEFPPE SEETEGTSRT
IVMAKNSAKN QHYNFEIWND YDRLTHGFAA TASFIVGAAG AAVGMSQTYW IGPVALAMGG
AYGGDIAMWL CMGFSGVAYP GLRYLELKKY GR
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