| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30685 |
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| Symbol | DAL4.1 |
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| ID | 4837719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 673488 |
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| End bp | 675215 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389034 |
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| Product | allantoin transport |
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| Protein accession | XP_001383412 |
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| Protein GI | 126133775 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.22109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCTT TAAAGAAACT AGACAAGTGG ATAGCTGTCG AGGATACCTC CACAGAAAGA
GGTGAAGACC AAATTAGAAG TAATGAGGAT TTGGATCCTA CTCCCTCTGA CCGAAGAACC
TGGAAAATGT ACAACTACAT TTTGATCTGG GCACAATCTG CATTCAACGT TAATGAATGG
AATACTGGTG CTAGTTTGAT GAAAGCTTCG GGTCTTCCAT ATGGTCAGAC CATTGGAAGT
GCCATTTTCT CCATTTTTGT TGCCGTTATC TTTACTATTG CCAATGCCAG AGCTGGCTCT
ACATATCACA TTGGCTACCC TACCCTCGCT AGAGCAACAT TCGGAGTTTA TGGTGCTTAC
TTTTTCGTAG CTGCTAGAGG TTTTGTGGCC ATTATTTGGT TCAGTGTTCA ATCATACTAT
GGCTCCATGT GTTTGGATGT TGCTTTGAGA TGTATGTTTG GACACAAATG GCTTGATTTG
AAAAACCACT TGCCTGCTAG TGCTGATGTG CAATCCAGGA TTTTACTTGC TTTCTTCTTG
TTTTGGTTGA TTCAATTCCC TTTGATGTTT GTACATCCAA GACAGATCAG ACATTTTTTC
ACTGTAAAAT CTTTTGTTTT GCCTTGTGCA ACCATTGGTT TGCTAATATT CTGTGTCAAG
AAGGGTCATG GTCCCGGTAA TTACGACTTG GGCTTACCTA TTAGCACTTC CTCTTCTGCT
ATTGGTTGGG GATGGATGTC CGTCATGAAC TCTATTTTCG GTACAATTTC CCCCATGATA
ATCAACCAGC CTGATATTGC CAGATATGCA AAAAAACCAA GTGACACCAT TTTGCCTCAA
GCTATTGGAT TTGTACTTGC TAAAATCATG ATCATGGTTG TTGGCATGGT TGCTACAGCT
TCTATCTACA GGTCTTATGG AGAGGTTTAC TGGAACATGT GGGACTTGAT GAACGCTATC
CTTGATCATT CTTGGAACGC CGGGGCCAGA ACAGGTGTCT TCTTTGTGGC AGTTTCTTTT
GGAATTGGTA CTGCTGGAAC TAATATCTTT GGTAACTCTA TCCCATTTGC TTGCGATATC
ACCGGTTTAT TACCAAAGTA CTTCACTATT TTAAGAGGAC AGATAGTAGT TGCCATTCTA
GCATGGGCCA TCGTTCCATG GAAGTTCTTA ACTGATGCTG CAAAGTTCTT AACTTTCTTG
GGAAGTTACT CTATCTTTGT TGGACCCATC CTTGGTTGTA TGTTGGCTGA TTACTACTTT
GTTAAGAGAG GTAACATCCA TGTACCTTCT TTGTTTACAA AGAAAAGTTC AGGGGTATAC
CATTATGTCT ACGGATGGAA CCTTTGGGCT TGTTTTGCTT GGGCTGGAGC TGCCAGTATT
TGTATTCCTG GTTTGTACAG AGCTTATTAT CCAGAATCTC TTAGCATTAG TGCTACTAGA
ATGTACCAAA TGGGATACAT TCTAACGACT ATTAGTAGTA TGGTCTTCTA CTACTGCTTG
AGTTTGATCT TCAAACCACA AATTTATCCA GAAGCTCACA GGGATACTCC AAAGACATGG
GAATACATGA GAACCACCGA TGGATTCTTT GAAGATGACT CTCCAATAGG CAAGGTTGGC
TACTTTGGTT CTGTCGATGT TTTCACAGGT GAGAAAGTTG ACACATCTGA AGGTTCTAGT
GTCAAAACTA AGAGCGAGAA GATATTGGAA ACTGTCTCTA TTGTTTAA
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| Protein sequence | MDALKKLDKW IAVEDTSTER GEDQIRSNED LDPTPSDRRT WKMYNYILIW AQSAFNVNEW
NTGASLMKAS GLPYGQTIGS AIFSIFVAVI FTIANARAGS TYHIGYPTLA RATFGVYGAY
FFVAARGFVA IIWFSVQSYY GSMCLDVALR CMFGHKWLDL KNHLPASADV QSRILLAFFL
FWLIQFPLMF VHPRQIRHFF TVKSFVLPCA TIGLLIFCVK KGHGPGNYDL GLPISTSSSA
IGWGWMSVMN SIFGTISPMI INQPDIARYA KKPSDTILPQ AIGFVLAKIM IMVVGMVATA
SIYRSYGEVY WNMWDLMNAI LDHSWNAGAR TGVFFVAVSF GIGTAGTNIF GNSIPFACDI
TGLLPKYFTI LRGQIVVAIL AWAIVPWKFL TDAAKFLTFL GSYSIFVGPI LGCMLADYYF
VKRGNIHVPS LFTKKSSGVY HYVYGWNLWA CFAWAGAASI CIPGLYRAYY PESLSISATR
MYQMGYILTT ISSMVFYYCL SLIFKPQIYP EAHRDTPKTW EYMRTTDGFF EDDSPIGKVG
YFGSVDVFTG EKVDTSEGSS VKTKSEKILE TVSIV
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