| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30629 |
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| Symbol | |
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| ID | 4837686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 548729 |
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| End bp | 550309 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389001 |
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| Product | predicted protein |
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| Protein accession | XP_001383740 |
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| Protein GI | 150864769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.555507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.773072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC CAGAAAAGGA TGCCTCGCAA GTGGCTGTAG ACCAAAAGTC TGTAGGCTCA
GTAGTCGAGT TCAAAGACCC AGCTCAGCTT GAGAAACGTT TCAGTCTCTG GAGCACTTGC
GCTTTGCAAT ACTCATTGAT CTGCTCTCCT TTGGCATTAG GAACTTTCTT AAGTACTGTC
ATTGGGGTCG GTGGGTCCCC GGTGTTGATA TACGGATTCA TTCTCTCAGC TACTATGAGT
TTGATCATCT GCTGTTCATT GGCAGAATTG GCTTCCGCAT ATCCTCATTC TTCAGCTCAG
GTCCATTGGA CATACTGTTT GGCTCCCAAA GCGTATAAGA GAGTGTTGTC GTTTGCTTCA
GGTATTCTCT CGTGTGCTGG TTGGATCTTT GCTTGCATCA GCTCTACATA TGTTGCATCC
ATGTTTATTC TTGCTTTGGC TCAGATATAC CATCCGGATT ACGTTCCTAA AAACTGGCAT
TACTACCTTG TATATGTTGC AATTATTGTA GCAGGGTACC TCATCAACGT ATTCTTCGTC
GTCATCTTGC CATACATGAT TGACGTGTTG GTTGCCATCA TCAACTTTGC TACTCTTTTT
GTCATCATCA CTTTACTTAT AAAGTCTGAT CCTAAGCAGT CCGCGAAATT CGTGTTCAAG
AATATCATCA ACGAAACAGG CTGGTCCTCT AATGGGGTGG TATTCTTCTT GGGACTTCTT
CCAAGTATTG CCAGTGTATG TTTGTTTGAT GGGGCTGCTC ATATGACTGA CGAAATTGCC
GAACCAGAAA GAAATATTCC TTTGGTCATG GTGATTTCCA ACAGTGTTTC TGCAGTGGTT
GCACTTTTCG CAGCCATTGT CTACATGTTC TGCATTGTTA GTATGGACAA CCTCAGTGTC
CCATTAGGTG GGCAACCAAT TGTTCAGTTG ATGTATGATT CTTTCAGTTC TAAGACTCTC
ACTACCATTG GTGTCTTGTG CTTCATTTTT ACCTTTGTAG GTTCCTCCTT CACTTACTAC
ACTTCCACTT CTAGACTTAT CTGGTCATTT TCAAAGTCCA AGGGTCTTCC TTTTGGAACT
TACTTTGGAA GAGTATCGCA AACTCTCAAG ACTCCAGTAT ATGCCTTGAC GTTTGTAACT
CTAATCTGTG CCATCCTAGG TACTATGATC ATGGGATCTT CTACGGCATT GTATGCTGTG
CTTGGTTCAG CCATGGTCTG TGTCAATCTC TCCTATGTTC CACCAATAAT GTGCTTATTG
ACAAGATCCA AGTTCTCGAT GTCTCCCTAC GTTAGGTTTG ACAACCAGGA TAGTCTGGTC
GCAGCTGTCT TGAAAGAAGG AAAGAGTTTG CCCTACTTCT CCTTGGGTAA GCTCGGTATG
CCTTTAAACA TCATCTCTGT GTTGTGGATC TGCTTTATCA TGATATGGTT GAACTTTCCC
ATCTACTATC CTGTGAGCAC TGCCAGTATG AACTACGCCT GCGTCGTCTT GGGCTGCACT
GGTATCTTTG GTCTTGCCGT GTGGTTATTC TATTCAGCCA AGCACTTTGA TCATGACGTG
GACTCCAAAC ATATACTTTA G
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| Protein sequence | MSSPEKDASQ VAVDQKSVGS VVEFKDPAQL EKRFSLWSTC ALQYSLICSP LALGTFLSTV
IGVGGSPVLI YGFILSATMS LIICCSLAEL ASAYPHSSAQ VHWTYCLAPK AYKRVLSFAS
GILSCAGWIF ACISSTYVAS MFILALAQIY HPDYVPKNWH YYLVYVAIIV AGYLINVFFV
VILPYMIDVL VAIINFATLF VIITLLIKSD PKQSAKFVFK NIINETGWSS NGVVFFLGLL
PSIASVCLFD GAAHMTDEIA EPERNIPLVM VISNSVSAVV ALFAAIVYMF CIVSMDNLSV
PLGGQPIVQL MYDSFSSKTL TTIGVLCFIF TFVGSSFTYY TSTSRLIWSF SKSKGLPFGT
YFGRVSQTLK TPVYALTFVT LICAILGTMI MGSSTALYAV LGSAMVCVNL SYVPPIMCLL
TRSKFSMSPY VRFDNQDSSV AAVLKEGKSL PYFSLGKLGM PLNIISVLWI CFIMIWLNFP
IYYPVSTASM NYACVVLGCT GIFGLAVWLF YSAKHFDHDV DSKHIL
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